RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA217180", tax_phylum = "Candidatus Iainarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Candidatus Iainarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA217180 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32065427 32065427 PRJNA217180_P_NODE_13938_length_164_cov_0.886957_g13838_i0 PRJNA217180 13938 164 0.886957 1.45460948 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 45.4 1.78e-4   NR MBI4210544.1 2026736 g13838 i0 55.3 0.695121951219512 38 17 69.5 0 159 46 38 75 MBI4210544.1 DNA-directed RNA polymerase subunit H [Candidatus Iainarchaeum archaeon] diamond 114 45.4 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;