RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA217180", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA217180 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30990393 30990393 PRJNA217180_P_NODE_15434_length_161_cov_0.910714_g15334_i0 PRJNA217180 15434 161 0.910714 1.46624954 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42.4 0.017   NR MCK4448129.1 2026760 g15334 i0 61.5 0.726708074534162 39 14 70.8 1 3 116 540 578 MCK4448129.1 hypothetical protein [Fidelibacterota bacterium] diamond 117 42.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32192134 32192134 PRJNA217180_P_NODE_15478_length_161_cov_0.910714_g15378_i0 PRJNA217180 15478 161 0.910714 1.46624954 Fidelibacterota bacterium 2026760 Bacteria Bacteria 41.6 0.0312   NR HDN59678.1 2026760 g15378 i0 45.7 0.857142857142857 46 23 83.9 2 3 137 212 256 HDN59678.1 hypothetical protein [Fidelibacterota bacterium] diamond 138 41.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;