RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA217180", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

  • Bacteria candidate phyla · 7 ✖

bioproject 1

  • PRJNA217180 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26694058 26694058 PRJNA217180_P_NODE_15321_length_161_cov_0.910714_g15221_i0 PRJNA217180 15321 161 0.910714 1.46624954 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 74.3 3.24e-14   NR MBA3678781.1 2026720 g15221 i0 82.5 1.49068322981366 40 7 74.5 0 120 1 1 40 MBA3678781.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 240 74.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28810514 28810514 PRJNA217180_P_NODE_13188_length_166_cov_0.871795_g13088_i0 PRJNA217180 13188 166 0.871795 1.4471797 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 67.4 2.5e-11   NR MEO7905068.1 2973664 g13088 i0 51.9 0.975903614457831 54 26 97.6 0 5 166 119 172 MEO7905068.1 metallophosphoesterase [Candidatus Saccharimonadales bacterium] diamond 162 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29568594 29568594 PRJNA217180_P_NODE_9670_length_189_cov_1.242857_g9570_i0 PRJNA217180 9670 189 1.242857 2.34899973 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 76.3 2.43e-15   NR MEP7205241.1 2026720 g9570 i0 63.5 0.825396825396825 52 17 82.5 1 158 3 95 144 MEP7205241.1 isoprenylcysteine carboxylmethyltransferase family protein [Candidatus Saccharibacteria bacterium] diamond 156 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31527817 31527817 PRJNA217180_P_NODE_9796_length_188_cov_1.374101_g9696_i0 PRJNA217180 9796 188 1.374101 2.58330988 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 49.3 6.83e-5   NR HSH31078.1 2973664 g9696 i0 54.2 0.765957446808511 48 22 76.6 0 145 2 72 119 HSH31078.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 144 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31545642 31545642 PRJNA217180_P_NODE_11276_length_176_cov_1.338583_g11176_i0 PRJNA217180 11276 176 1.338583 2.35590608 Bacteria 2 Bacteria Bacteria 109 5.15e-26   NR MCA9345291.1 2026720 g11176 i0 91.4 5.93181818181818 58 5 98.9 0 1 174 334 391 MCA9345291.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Candidatus Saccharibacteria bacterium] diamond 1044 110 0.990909090909091 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32287291 32287291 PRJNA217180_P_NODE_13639_length_165_cov_0.879310_g13539_i0 PRJNA217180 13639 165 0.87931 1.4508615 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 64.7 1.5e-10   NR HSX14396.1 2973664 g13539 i0 64.8 0.981818181818182 54 19 98.2 0 164 3 173 226 HSX14396.1 DNA-processing protein DprA [Candidatus Saccharimonadales bacterium] diamond 162 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32350445 32350445 PRJNA217180_P_NODE_14759_length_162_cov_0.902655_g14659_i0 PRJNA217180 14759 162 0.902655 1.4623011 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 68.2 7.12e-12   NR MBA3678777.1 2026720 g14659 i0 71.7 0.981481481481482 53 15 98.1 0 162 4 7 59 MBA3678777.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 159 68.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;