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contig_metadata

12 rows where bioproject = "PRJNA207719" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA207719 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6158752 6158752 PRJNA207719_P_NODE_905_length_201_cov_3.046512_g885_i0 PRJNA207719 905 201 3.046512 6.12348912 Gyrodactylidae 37845 Platyhelminthes Platyhelminthes 355 1.19e-93   NTclustered gi|44885231|emb|AJ542394.1| 37629 g885 i0 98.515 102.194029850746 202 2 100 1 1 201 3192 2991 Gyrodactylus salaris 28S rRNA gene blastn 20541 355 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Gyrodactylus Gyrodactylus salaris
8020474 8020474 PRJNA207719_P_NODE_307_length_384_cov_3.129577_g287_i0 PRJNA207719 307 384 3.129577 12.01757568 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 174 6.93e-52   NR KAL3316812.1 1844966 g287 i0 69.5 1 128 39 100 0 384 1 57 184 KAL3316812.1 hypothetical protein Ciccas_004541 [Cichlidogyrus casuarinus] diamond 384 174 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
20768583 20768583 PRJNA207719_P_NODE_1297_length_155_cov_1.730159_g1277_i0 PRJNA207719 1297 155 1.730159 2.68174645 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 88.6 6.24e-19   NR KAL3314241.1 1844966 g1277 i0 69.2 12.7161290322581 65 5 96.8 1 153 4 113 177 KAL3314241.1 60S ribosomal protein L4 [Cichlidogyrus casuarinus] diamond 1971 88.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
20768584 20768584 PRJNA207719_P_NODE_357_length_357_cov_2.597561_g337_i0 PRJNA207719 357 357 2.597561 9.27329277 Gyrodactylus macracanthus 607939 Platyhelminthes Platyhelminthes 238 1.78e-77   NR ACT54579.1 607939 g337 i0 95.8 0.991596638655462 118 5 99.2 0 2 355 24 141 ACT54579.1 elongation factor 1 alpha, partial [Gyrodactylus macracanthus] diamond 354 238 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Macracanthus Macracanthus macracanthus
22043643 22043643 PRJNA207719_P_NODE_1098_length_177_cov_2.952703_g1078_i0 PRJNA207719 1098 177 2.952703 5.22628431 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 94 1.07e-21   NR KAL3316812.1 1844966 g1078 i0 78.9 0.966101694915254 57 12 96.6 0 177 7 192 248 KAL3316812.1 hypothetical protein Ciccas_004541 [Cichlidogyrus casuarinus] diamond 171 94 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
24593298 24593298 PRJNA207719_P_NODE_400_length_330_cov_2.109635_g380_i0 PRJNA207719 400 330 2.109635 6.9617955 Macrogyrodactylus karibae 696689 Platyhelminthes Platyhelminthes 383 9.699999999999998e-102   NTclustered gi|1346678829|gb|MG973078.1| 696689 g380 i0 87.651 35.9757575757576 332 38 100 3 1 330 6235 6565 Macrogyrodactylus karibae isolate M_ka small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11872 383 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Gyrodactylidea Gyrodactylidae Macrogyrodactylus Macrogyrodactylus karibae
26806969 26806969 PRJNA207719_P_NODE_881_length_206_cov_2.056497_g861_i0 PRJNA207719 881 206 2.056497 4.23638382 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 101 1.95e-26   NR KAH9280715.1 6210 g861 i0 95.6 1.98058252427184 68 3 99 0 2 205 3 70 KAH9280715.1 hypothetical protein ECG_07396 [Echinococcus granulosus] diamond 408 101 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
27642839 27642839 PRJNA207719_P_NODE_1244_length_161_cov_1.621212_g1224_i0 PRJNA207719 1244 161 1.621212 2.61015132 Echinostoma caproni 27848 Platyhelminthes Platyhelminthes 67 1.48e-12   NR VDP93666.1 27848 g1224 i0 64.7 3.80124223602484 51 18 95 0 8 160 7 57 VDP93666.1 unnamed protein product [Echinostoma caproni] diamond 612 67 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
28116142 28116142 PRJNA207719_P_NODE_465_length_306_cov_2.808664_g445_i0 PRJNA207719 465 306 2.808664 8.59451184 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 42.4 0.0118   NR CDS27476.1 85433 g445 i0 46.5 0.42156862745098 43 19 38.2 1 299 183 1 43 CDS27476.1 expressed protein [Hymenolepis microstoma] diamond 129 42.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
28955176 28955176 PRJNA207719_P_NODE_688_length_241_cov_3.452830_g668_i0 PRJNA207719 688 241 3.45283 8.3213203 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 77.4 1.26e-16   NR KAH9280715.1 6210 g668 i0 92.1 0.946058091286307 38 3 47.3 0 237 124 8 45 KAH9280715.1 hypothetical protein ECG_07396 [Echinococcus granulosus] diamond 228 77.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
30471068 30471068 PRJNA207719_P_NODE_1173_length_169_cov_1.885714_g1153_i0 PRJNA207719 1173 169 1.885714 3.18685666 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 1.7500000000000002e-26   NR QGN03550.1 6161 g1153 i0 94.5 158.165680473373 55 3 97.6 0 3 167 35 89 QGN03550.1 heat shock protein 70-2 [Dugesia japonica] diamond 26730 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
32287289 32287289 PRJNA207719_P_NODE_1319_length_153_cov_1.790323_g1299_i0 PRJNA207719 1319 153 1.790323 2.73919419 Cichlidogyrus casuarinus 1844966 Platyhelminthes Platyhelminthes 80.5 5.26e-16   NR KAL3309952.1 1844966 g1299 i0 72 4.90196078431373 50 14 98 0 151 2 607 656 KAL3309952.1 Elongation factor 2, partial [Cichlidogyrus casuarinus] diamond 750 80.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;