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contig_metadata

7 rows where bioproject = "PRJNA207719" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA207719 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2917688 2917688 PRJNA207719_P_NODE_1043_length_183_cov_6.110390_g1023_i0 PRJNA207719 1043 183 6.11039 11.1820137 Ogataea polymorpha 460523 Fungi Fungi 108 3.28e-19   NTclustered gi|1069844604|ref|XM_018356494.1| 460523 g1023 i0 81.481 75.4972677595628 135 21 73 4 47 179 2331 2199 Ogataea polymorpha translation elongation factor 1-alpha (OGAPODRAFT_81190), mRNA blastn 13816 108 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Ogataea Ogataea polymorpha
3606521 3606521 PRJNA207719_P_NODE_323_length_375_cov_9.641618_g303_i0 PRJNA207719 323 375 9.641618 36.1560675 root 1 Root_unresolved Root_unresolved 686 0   NTclustered gi|1275558205|ref|NG_055690.1| 4931 g303 i0 99.733 116.336 374 1 99 0 1 374 2913 3286 Saccharomyces bayanus NRRL Y-12624 28S rRNA gene, partial sequence; from TYPE material blastn 43626 691 0.992764109985528 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces bayanus
4883998 4883998 PRJNA207719_P_NODE_1104_length_176_cov_4.673469_g1084_i0 PRJNA207719 1104 176 4.673469 8.22530544 root 1 Root_unresolved Root_unresolved 302 1.34e-77   NTclustered gi|1102645715|gb|KY109285.1| 4932 g1084 i0 98.266 106.159090909091 173 2 98 1 1 172 223 51 Saccharomyces cerevisiae culture CBS:459 large subunit ribosomal RNA gene, partial sequence blastn 18684 302 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
7433939 7433939 PRJNA207719_P_NODE_546_length_276_cov_13.558704_g526_i0 PRJNA207719 546 276 13.558704 37.42202304 root 1 Root_unresolved Root_unresolved 497 2.7099999999999998e-136   NTclustered gi|1389182097|gb|CP029160.1| 4932 g526 i0 99.273 113.260869565217 275 2 99 0 1 275 3881781 3881507 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 31260 497 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
10571134 10571134 PRJNA207719_P_NODE_629_length_252_cov_8.928251_g609_i0 PRJNA207719 629 252 8.928251 22.49919252 Aspergillus chevalieri 182096 Fungi Fungi 459 1.1499999999999996e-124   NTclustered gi|2086743560|ref|XR_006253225.1| 182096 g609 i0 99.602 105.547619047619 251 1 99 0 2 252 2509 2259 Aspergillus chevalieri 28S ribosomal RNA (ACHE_r70002S), rRNA blastn 26598 459 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus chevalieri
20182082 20182082 PRJNA207719_P_NODE_256_length_425_cov_5.446970_g236_i0 PRJNA207719 256 425 5.44697 23.1496225 root 1 Root_unresolved Root_unresolved 647 0   NTclustered gi|1389182097|gb|CP029160.1| 4932 g236 i0 92.986 118.484705882353 442 14 100 1 1 425 3881792 3882233 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 50356 647 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
21457774 21457774 PRJNA207719_P_NODE_1157_length_171_cov_4.690141_g1137_i0 PRJNA207719 1157 171 4.690141 8.02014111 root 1 Root_unresolved Root_unresolved 63.9 6.62e-6   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g1137 i0 85.714 1.50877192982456 63 6 37 1 43 105 2198 2257 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 258 63.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;