RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA207343" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA207343 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5470405 5470405 PRJNA207343_S_NODE_9305_length_178_cov_2.943262_g8768_i0 PRJNA207343 9305 178 2.943262 5.23900636 Inoviridae sp. 2219103 Viruses Viruses 285 1.3599999999999998e-72   NTclustered gi|1436206075|gb|MH617060.1| 2219103 g8768 i0 96.512 3.88202247191011 172 6 97 0 1 172 2210 2039 MAG: Inoviridae sp. isolate ctcg21, complete genome blastn 691 285 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
10571046 10571046 PRJNA207343_S_NODE_7369_length_217_cov_2.061111_g6832_i0 PRJNA207343 7369 217 2.061111 4.47261087 Inoviridae sp. 2219103 Viruses Viruses 368 1.68e-97   NTclustered gi|1436206075|gb|MH617060.1| 2219103 g6832 i0 97.235 2 217 6 100 0 1 217 4533 4317 MAG: Inoviridae sp. isolate ctcg21, complete genome blastn 434 368 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
23318870 23318870 PRJNA207343_S_NODE_1599_length_770_cov_5.803547_g1215_i0 PRJNA207343 1599 770 5.803547 44.6873119 Inoviridae sp. 2219103 Viruses Viruses 497 8.26e-136   NTclustered gi|2056792906|tpg|BK057154.1| 2219103 g1215 i0 90.339 3.90779220779221 383 31 64 4 19 398 4991 5370 MAG TPA_asm: Inoviridae sp. isolate ct3qb1, partial genome blastn 3009 497 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;