RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA207343", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA207343 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
366745 366745 PRJNA207343_S_NODE_10561_length_161_cov_1.677419_g10024_i0 PRJNA207343 10561 161 1.677419 2.70064459 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 281 1.57e-71   NTclustered gi|681870004|gb|KM001687.1| 1542451 g10024 i0 100 78.055900621118 152 0 94 0 10 161 432 281 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 12567 281 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
23318812 23318812 PRJNA207343_S_NODE_10199_length_165_cov_3.875000_g9662_i0 PRJNA207343 10199 165 3.875 6.39375 Myxobolus cloutmani 2766936 Cnidaria other_Eukaryota 187 3.6199999999999985e-43   NTclustered gi|1896054819|gb|MT919695.1| 2766936 g9662 i0 99.038 60.7212121212121 104 1 63 0 1 104 2100 1997 Myxobolus cloutmani isolate CTM large subunit ribosomal RNA gene, partial sequence blastn 10019 187 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus cloutmani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;