RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA207343", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA207343 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2331296 2331296 PRJNA207343_S_NODE_8662_length_189_cov_1.421053_g8125_i0 PRJNA207343 8662 189 1.421053 2.68579017 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 187 4.26e-43   NTclustered gi|11037201|gb|AF208879.1|AF208879 140242 g8125 i0 99.038 69.2275132275132 104 1 55 0 86 189 497 600 Cruzella marina large subunit ribosomal RNA gene, partial sequence blastn 13084 187 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cruzella Cruzella marina
12534564 12534564 PRJNA207343_S_NODE_5490_length_285_cov_3.709677_g4953_i0 PRJNA207343 5490 285 3.709677 10.57257945 Trypanosoma 5690 Euglenozoa other_Eukaryota 433 8.05e-117   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g4953 i0 94.056 158.919298245614 286 15 100 2 1 285 4692 4408 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 45292 433 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;