RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA206070", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 10 ✖

tax_phylum 1

  • Acidobacteriota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA206070 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
366494 366494 PRJNA206070_S_NODE_29861_length_155_cov_1.000000_g27985_i0 PRJNA206070 29861 155 1 1.55 uncultured Granulicella sp. 1241325 Bacteria Bacteria 193 7.2e-45   NTclustered gi|2836016418|emb|OZ196148.1| 1241325 g27985 i0 90.476 71.0709677419355 147 12 94 2 1 146 505025 504880 MAG: uncultured Granulicella sp. isolate 9057d4d9-b77b-4c6f-b84b-ea5519435b63 genome assembly, chromosome: 1 blastn 11016 193 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella uncultured Granulicella sp.
2917270 2917270 PRJNA206070_S_NODE_563_length_9489_cov_27.792319_g225_i0 PRJNA206070 563 9489 27.792319 2637.21314991 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 502 1.46e-144   NR MBV9266765.1 2052142 g225 i0 31.3 0.456844767625672 1445 790 43 51 8744 4668 39 1367 MBV9266765.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 4335 502 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
10570192 10570192 PRJNA206070_S_NODE_12569_length_310_cov_51.293040_g10693_i0 PRJNA206070 12569 310 51.29304 159.008424 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 117 1.0100000000000002e-21   NTclustered gi|2874253852|emb|OY969908.1| 194844 g10693 i0 79.518 0.535483870967742 166 32 53 2 8 172 3113629 3113793 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09286.bin.1.44 genome assembly, chromosome: 1 blastn 166 117 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
11845187 11845187 PRJNA206070_S_NODE_590_length_9241_cov_23.118427_g225_i1 PRJNA206070 590 9241 23.118427 2136.37383907 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 502 1.3999999999999994e-144   NR MBV9266765.1 2052142 g225 i1 31.3 0.469105075208311 1445 790 44.1 51 8584 4508 39 1367 MBV9266765.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 4335 502 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
20181716 20181716 PRJNA206070_S_NODE_24836_length_174_cov_1.569343_g22960_i0 PRJNA206070 24836 174 1.569343 2.73065682 Acidobacteriaceae 204434 Bacteria Bacteria 193 8.269999999999999e-45   NTclustered gi|1431854037|gb|CP030840.1| 2211140 g22960 i0 95.161 39.6379310344828 124 3 71 3 36 158 1123229 1123350 Acidisarcina polymorpha strain SBC82 chromosome, complete genome blastn 6897 193 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidisarcina Acidisarcina polymorpha
24592839 24592839 PRJNA206070_S_NODE_5440_length_681_cov_68.972050_g3644_i0 PRJNA206070 5440 681 68.97205 469.6996605 Terriglobales bacterium 2282142 Bacteria Bacteria 392 1.16e-132   NR HEY4959407.1 2282142 g3644 i0 87.1 0.991189427312775 225 29 99.1 0 6 680 30 254 HEY4959407.1 group II intron reverse transcriptase/maturase [Terriglobales bacterium] diamond 675 392 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27516330 27516330 PRJNA206070_S_NODE_30663_length_152_cov_3.704348_g28787_i0 PRJNA206070 30663 152 3.704348 5.63060896 Candidatus Sulfotelmatobacter sp. 2771375 Bacteria Bacteria 42.4 0.0148   NR HVH59780.1 2771375 g28787 i0 45.7 0.907894736842105 46 24 88.8 1 18 152 154 199 HVH59780.1 hypothetical protein [Candidatus Sulfotelmatobacter sp.] diamond 138 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Candidatus Sulfotelmatobacter sp.
27706172 27706172 PRJNA206070_S_NODE_9004_length_418_cov_3.803150_g7131_i0 PRJNA206070 9004 418 3.80315 15.897167 Acidobacteriota bacterium 1978231 Bacteria Bacteria 47 0.00813   NR MBE3072480.1 1978231 g7131 i0 55 0.287081339712919 40 18 28.7 0 129 10 866 905 MBE3072480.1 PKD domain-containing protein [Acidobacteriota bacterium] diamond 120 47 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29221527 29221527 PRJNA206070_S_NODE_30189_length_154_cov_1.051282_g28313_i0 PRJNA206070 30189 154 1.051282 1.61897428 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 42 0.0123   NR HEY7306840.1 2212468 g28313 i0 47.5 2.35714285714286 40 21 77.9 0 152 33 101 140 HEY7306840.1 hypothetical protein [Bryobacteraceae bacterium] diamond 363 42 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30769146 30769146 PRJNA206070_S_NODE_12914_length_304_cov_2.752809_g11038_i0 PRJNA206070 12914 304 2.752809 8.36853936 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 58.9 1.13e-7   NR MFN2406749.1 2283092 g11038 i0 39 0.809210526315789 82 50 80.9 0 252 7 167 248 MFN2406749.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 246 58.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;