contig_metadata
5 rows where bioproject = "PRJNA206070", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 366424 | 366424 | PRJNA206070_S_NODE_26241_length_167_cov_2.546154_g24365_i0 | PRJNA206070 | 26241 | 167 | 2.546154 | 4.25207718 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 213 | 6.07e-51 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g24365 | i0 | 89.881 | 7.9940119760479 | 168 | 14 | 99 | 2 | 1 | 165 | 1867601 | 1867768 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 1335 | 213 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 9294449 | 9294449 | PRJNA206070_S_NODE_22248_length_189_cov_1.789474_g20372_i0 | PRJNA206070 | 22248 | 189 | 1.789474 | 3.38210586 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 83.6 | 1.07e-17 | NR | HZV04970.1 | 2052164 | g20372 | i0 | 64.5 | 3.82539682539683 | 62 | 22 | 98.4 | 0 | 187 | 2 | 160 | 221 | HZV04970.1 class II aldolase/adducin family protein [Gemmataceae bacterium] | diamond | 723 | 83.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 18218195 | 18218195 | PRJNA206070_S_NODE_31275_length_151_cov_1.245614_g29399_i0 | PRJNA206070 | 31275 | 151 | 1.245614 | 1.88087714 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 171 | 3.26e-38 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g29399 | i0 | 87.662 | 31.5364238410596 | 154 | 10 | 99 | 3 | 2 | 151 | 7050665 | 7050813 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 4762 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 23318377 | 23318377 | PRJNA206070_S_NODE_19219_length_213_cov_1.875000_g17343_i0 | PRJNA206070 | 19219 | 213 | 1.875 | 3.99375 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 302 | 1.69e-77 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g17343 | i0 | 92.891 | 43.0046948356808 | 211 | 10 | 98 | 4 | 1 | 209 | 4317533 | 4317326 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 9160 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 31102651 | 31102651 | PRJNA206070_S_NODE_19395_length_211_cov_3.775862_g17519_i0 | PRJNA206070 | 19395 | 211 | 3.775862 | 7.96706882 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 84 | 5.88e-17 | NR | WP_020469806.1 | 360055 | g17519 | i0 | 58 | 2.80094786729858 | 69 | 29 | 98.1 | 0 | 3 | 209 | 152 | 220 | WP_020469806.1 hypothetical protein [Zavarzinella formosa] | diamond | 591 | 84 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Zavarzinella | Zavarzinella formosa |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;