RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA195897" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA195897 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11844531 11844531 PRJNA195897_P_NODE_2930_length_288_cov_1.598326_g2897_i0 PRJNA195897 2930 288 1.598326 4.60317888 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 144 9.959999999999998e-42   NR XP_067763597.1 348837 g2897 i0 68.4 6.9375 95 30 99 0 1 285 5 99 XP_067763597.1 Nucleoside diphosphate kinase [Spironucleus salmonicida] diamond 1998 144 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
27010543 27010543 PRJNA195897_P_NODE_4302_length_230_cov_1.690608_g4269_i0 PRJNA195897 4302 230 1.6906080000000001 3.8883984 Kipferlia bialata 797122 Fornicata other_Eukaryota 105 8.83e-27   NR GCA62497.1 797122 g4269 i0 63.4 1.81304347826087 71 26 92.6 0 17 229 1 71 GCA62497.1 adaptor protein complex, sigma subunit [Kipferlia bialata] diamond 417 105 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
28147937 28147937 PRJNA195897_P_NODE_25_length_2240_cov_4.745778_g24_i0 PRJNA195897 25 2240 4.745778 106.3054272 Kipferlia bialata 797122 Fornicata other_Eukaryota 52 0.0156   NR GIQ80334.1 797122 g24 i0 30.2 0.628125 281 144 32.7 13 1584 853 1029 1294 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 1407 52 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
28589994 28589994 PRJNA195897_P_NODE_5927_length_201_cov_1.085526_g5894_i0 PRJNA195897 5927 201 1.085526 2.18190726 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 75.1 3.07e-14   NR KAG9389650.1 201153 g5894 i0 64.9 0.850746268656716 57 20 85.1 0 30 200 65 121 KAG9389650.1 Conserved hypothetical protein CHP02452 [Carpediemonas membranifera] diamond 171 75.1 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30547848 30547848 PRJNA195897_P_NODE_5713_length_204_cov_0.838710_g5680_i0 PRJNA195897 5713 204 0.83871 1.7109684 Hexamita inflata 28002 Fornicata other_Eukaryota 57 9.68e-8   NR CAK8747467.1 28002 g5680 i0 73.5 1.08823529411765 34 9 50 0 56 157 9 42 CAK8747467.1 HINF_081584 [Hexamita inflata] diamond 222 57 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31116350 31116350 PRJNA195897_P_NODE_11535_length_164_cov_0.904348_g11502_i0 PRJNA195897 11535 164 0.904348 1.48313072 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 55.1 5.44e-7   NR KAG9390902.1 201153 g11502 i0 57.9 0.695121951219512 38 16 69.5 0 1 114 288 325 KAG9390902.1 hypothetical protein J8273_7167 [Carpediemonas membranifera] diamond 114 55.1 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32160558 32160558 PRJNA195897_P_NODE_18_length_2344_cov_10.471895_g17_i0 PRJNA195897 18 2344 10.471895 245.4612188 Kipferlia bialata 797122 Fornicata other_Eukaryota 52.4 0.0126   NR GIQ80334.1 797122 g17 i0 27.3 0.262372013651877 205 129 23.9 7 1682 1122 719 921 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 615 52.4 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;