contig_metadata
9 rows where bioproject = "PRJNA195897", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6743643 | 6743643 | PRJNA195897_P_NODE_2586_length_310_cov_2.084291_g2553_i0 | PRJNA195897 | 2586 | 310 | 2.084291 | 6.4613021 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 412 | 1.1499999999999998e-110 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g2553 | i0 | 90.645 | 555.01935483871 | 310 | 29 | 100 | 0 | 1 | 310 | 511701 | 511392 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 172056 | 412 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 7433191 | 7433191 | PRJNA195897_P_NODE_6626_length_192_cov_1.307692_g6593_i0 | PRJNA195897 | 6626 | 192 | 1.307692 | 2.51076864 | Bdellovibrio | 958 | Bacteria | Bacteria | 283 | 5.39e-72 | NTclustered | gi|2800914199|gb|CP168971.1| | 959 | g6593 | i0 | 93.333 | 127.697916666667 | 195 | 8 | 100 | 5 | 1 | 192 | 748393 | 748585 | Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome | blastn | 24518 | 283 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 9294027 | 9294027 | PRJNA195897_P_NODE_11928_length_163_cov_0.912281_g11895_i0 | PRJNA195897 | 11928 | 163 | 0.912281 | 1.48701803 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 268 | 1.24e-67 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g11895 | i0 | 96.319 | 4.57668711656442 | 163 | 6 | 100 | 0 | 1 | 163 | 1292285 | 1292447 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 746 | 268 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 15668819 | 15668819 | PRJNA195897_P_NODE_7373_length_184_cov_1.155556_g7340_i0 | PRJNA195897 | 7373 | 184 | 1.155556 | 2.12622304 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 252 | 1.44e-62 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g7340 | i0 | 91.304 | 257.858695652174 | 184 | 16 | 100 | 0 | 1 | 184 | 612914 | 613097 | Bdellovibrio bacteriovorus W, complete genome | blastn | 47446 | 252 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 17632940 | 17632940 | PRJNA195897_P_NODE_8174_length_176_cov_1.220472_g8141_i0 | PRJNA195897 | 8174 | 176 | 1.220472 | 2.14803072 | Bdellovibrio | 958 | Bacteria | Bacteria | 233 | 4.94e-57 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g8141 | i0 | 91.765 | 85 | 170 | 11 | 95 | 3 | 9 | 176 | 1607850 | 1608018 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 14960 | 233 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 18906750 | 18906750 | PRJNA195897_P_NODE_8295_length_175_cov_0.984127_g8262_i0 | PRJNA195897 | 8295 | 175 | 0.984127 | 1.72222225 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 263 | 6.26e-66 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g8262 | i0 | 93.75 | 118.297142857143 | 176 | 9 | 100 | 2 | 1 | 175 | 328 | 502 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 20702 | 263 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 26820942 | 26820942 | PRJNA195897_P_NODE_11941_length_163_cov_0.912281_g11908_i0 | PRJNA195897 | 11941 | 163 | 0.912281 | 1.48701803 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 108 | 1.14e-25 | NR | MBL7556853.1 | 2026715 | g11908 | i0 | 96.2 | 0.975460122699387 | 53 | 2 | 97.5 | 0 | 162 | 4 | 667 | 719 | MBL7556853.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 159 | 108 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 27421822 | 27421822 | PRJNA195897_P_NODE_603_length_695_cov_4.232198_g573_i0 | PRJNA195897 | 603 | 695 | 4.232198 | 29.4137761 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 105 | 7.31e-24 | NR | MBT6325281.1 | 2053517 | g573 | i0 | 32.5 | 2.60719424460432 | 200 | 128 | 83.3 | 4 | 45 | 623 | 10 | 209 | MBT6325281.1 glutathione S-transferase [Bdellovibrionales bacterium] | diamond | 1812 | 105 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27516308 | 27516308 | PRJNA195897_P_NODE_6943_length_188_cov_1.870504_g6910_i0 | PRJNA195897 | 6943 | 188 | 1.870504 | 3.51654752 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 79.3 | 1.21e-17 | NR | MCB0369232.1 | 2053517 | g6910 | i0 | 80.5 | 0.654255319148936 | 41 | 8 | 65.4 | 0 | 65 | 187 | 21 | 61 | MCB0369232.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 123 | 79.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;