RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA195897", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA195897 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5469333 5469333 PRJNA195897_P_NODE_45_length_1864_cov_3.087603_g40_i0 PRJNA195897 45 1864 3.087603 57.55291992 Fungi 4751 Fungi Fungi 324 5.659999999999998e-101   NR KAI9137536.1 1500003 g40 i0 46 21.1738197424893 391 196 61.8 7 1623 472 30 412 KAI9137536.1 hypothetical protein BKA69DRAFT_1097502 [Paraphysoderma sedebokerense] diamond 39468 325 0.996923076923077 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29379210 29379210 PRJNA195897_P_NODE_4009_length_239_cov_1.636842_g3976_i0 PRJNA195897 4009 239 1.636842 3.91205238 Coelomomyces lativittatus 945690 Fungi Fungi 62 5.72e-9   NR KAJ1514847.1 945690 g3976 i0 39.7 4.78242677824268 73 35 91.6 1 237 19 152 215 KAJ1514847.1 hypothetical protein HMI54_013345 [Coelomomyces lativittatus] diamond 1143 62 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
29473627 29473627 PRJNA195897_P_NODE_3930_length_243_cov_1.108247_g3897_i0 PRJNA195897 3930 243 1.108247 2.69304021 Paraphysoderma sedebokerense 1500003 Fungi Fungi 59.3 5.31e-8   NR KAI9139907.1 1500003 g3897 i0 47.6 1.74074074074074 82 32 98.8 3 242 3 583 655 KAI9139907.1 FAD binding domain-containing protein, partial [Paraphysoderma sedebokerense] diamond 423 59.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
30390336 30390336 PRJNA195897_P_NODE_2373_length_327_cov_2.086331_g2340_i0 PRJNA195897 2373 327 2.086331 6.82230237 Catenaria anguillulae PL171 765915 Fungi Fungi 44.7 0.0189   NR ORZ32012.1 765915 g2340 i0 47.8 0.422018348623853 46 24 42.2 0 189 326 16 61 ORZ32012.1 hypothetical protein BCR44DRAFT_1441218 [Catenaria anguillulae PL171] diamond 138 44.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
31685675 31685675 PRJNA195897_P_NODE_5337_length_210_cov_0.968944_g5304_i0 PRJNA195897 5337 210 0.968944 2.0347824 Paraphysoderma sedebokerense 1500003 Fungi Fungi 71.6 1.25e-13   NR KAI9138735.1 1500003 g5304 i0 63.2 4.05714285714286 57 21 81.4 0 2 172 104 160 KAI9138735.1 V-type ATPase [Paraphysoderma sedebokerense] diamond 852 71.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
32729151 32729151 PRJNA195897_P_NODE_1560_length_419_cov_2.554054_g1527_i0 PRJNA195897 1560 419 2.554054 10.70148626 Catenaria anguillulae PL171 765915 Fungi Fungi 94.4 1.05e-21   NR ORZ39709.1 765915 g1527 i0 46 1.77565632458234 113 41 66.6 1 389 111 6 118 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 744 94.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32854960 32854960 PRJNA195897_P_NODE_3560_length_256_cov_1.927536_g3527_i0 PRJNA195897 3560 256 1.927536 4.93449216 Paraphysoderma sedebokerense 1500003 Fungi Fungi 97.8 3.11e-24   NR KAI9146259.1 1500003 g3527 i0 53 0.97265625 83 39 97.3 0 7 255 18 100 KAI9146259.1 60S ribosomal protein l35a [Paraphysoderma sedebokerense] diamond 249 97.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;