RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA195897", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA195897 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28273966 28273966 PRJNA195897_P_NODE_946_length_546_cov_3.595573_g915_i0 PRJNA195897 946 546 3.595573 19.63182858 Paratrimastix eleionoma 1709329 Preaxostyla other_Eukaryota 151 3.02e-43   NR WCZ58434.1 1709329 g915 i0 61.1 6.02747252747253 126 48 69.2 1 534 157 1 125 WCZ58434.1 translation initiation factor 1A [Paratrimastix eleionoma] diamond 3291 151 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma
28558415 28558415 PRJNA195897_P_NODE_9267_length_169_cov_0.866667_g9234_i0 PRJNA195897 9267 169 0.866667 1.46466723 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 69.7 2.72e-12   NR KAJ4457972.1 342808 g9234 i0 63.6 0.976331360946746 55 16 97.6 1 167 3 35 85 KAJ4457972.1 putative Aldose reductase A [Paratrimastix pyriformis] diamond 165 69.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31591124 31591124 PRJNA195897_P_NODE_6816_length_190_cov_1.106383_g6783_i0 PRJNA195897 6816 190 1.106383 2.1021277 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 80.9 2.52e-16   NR KAJ4461978.1 342808 g6783 i0 51.6 0.978947368421053 62 30 97.9 0 188 3 211 272 KAJ4461978.1 putative Dimethyladenosine transferase [Paratrimastix pyriformis] diamond 186 80.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31748958 31748958 PRJNA195897_P_NODE_6797_length_190_cov_1.375887_g6764_i0 PRJNA195897 6797 190 1.375887 2.6141853 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 73.2 3.42e-13   NR KAJ4461998.1 342808 g6764 i0 50.8 1.91052631578947 63 31 99.5 0 189 1 273 335 KAJ4461998.1 putative Glycoside hydrolase [Paratrimastix pyriformis] diamond 363 73.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;