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contig_metadata

14 rows where bioproject = "PRJNA193544" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA193544 · 14 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1640693 1640693 PRJNA193544_S_NODE_502_length_316_cov_12802.303136_g487_i0 PRJNA193544 502 316 12802.303136 40455.27790976 Adineta vaga 104782 Rotifera other_Eukaryota 514 3.1399999999999996e-141   NTclustered gi|259129963|gb|GQ398061.1| 104782 g487 i0 99.296 65.9588607594937 284 2 90 0 33 316 4444 4161 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 20843 514 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2330508 2330508 PRJNA193544_S_NODE_1222_length_231_cov_19781.851485_g1207_i0 PRJNA193544 1222 231 19781.851485 45696.07693035 Eurotatoria 2816136 Rotifera other_Eukaryota 364 2.329999999999999e-96   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g1207 i0 100 85.7142857142857 197 0 85 0 1 197 1425 1621 Philodina acuticornis 18S rRNA gene blastn 19800 366 0.994535519125683 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
2916590 2916590 PRJNA193544_S_NODE_983_length_252_cov_32.959641_g968_i0 PRJNA193544 983 252 32.959641 83.05829532 Brachionus patulus 160652 Rotifera other_Eukaryota 302 2.06e-77   NTclustered gi|61200806|gb|AY829084.1| 160652 g968 i0 88.281 41.4603174603175 256 25 100 5 1 252 1807 2061 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 10448 302 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
3605696 3605696 PRJNA193544_S_NODE_163_length_418_cov_9131.372751_g149_i0 PRJNA193544 163 418 9131.372751 38169.13809918 Brachionus 10194 Rotifera other_Eukaryota 564 4.179999999999999e-156   NTclustered gi|83285080|gb|DQ297692.1| 104777 g149 i0 93.041 92.8253588516746 388 24 92 3 1 385 597 984 Brachionus calyciflorus 18S ribosomal RNA gene, partial sequence blastn 38801 564 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
7433112 7433112 PRJNA193544_S_NODE_126_length_438_cov_23.044010_g113_i0 PRJNA193544 126 438 23.04401 100.9327638 Ploima 84394 Rotifera other_Eukaryota 381 4.749999999999999e-101   NTclustered gi|72153738|gb|DQ089740.1| 204736 g113 i0 88.679 60.9703196347032 318 28 71 5 127 438 317 2 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 26705 381 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
11844429 11844429 PRJNA193544_S_NODE_1210_length_232_cov_19363.600985_g1195_i0 PRJNA193544 1210 232 19363.600985 44923.5542852 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 296 8.68e-76   NTclustered gi|478683563|gb|KC193096.1| 104777 g1195 i0 93.532 67.3922413793103 201 9 86 4 1 199 2659 2857 Brachionus calyciflorus 28S ribosomal RNA gene, partial sequence blastn 15635 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
14394977 14394977 PRJNA193544_S_NODE_232_length_382_cov_18.725212_g217_i0 PRJNA193544 232 382 18.725212 71.53030984 Euchlanis alata 338269 Rotifera other_Eukaryota 455 2.38e-123   NTclustered gi|83655555|gb|DQ079942.1| 338269 g217 i0 88.114 71.7434554973822 387 41 100 3 1 382 254 640 Euchlanis alata 28S ribosomal RNA gene, partial sequence blastn 27406 455 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Euchlanis Euchlanis alata
14395006 14395006 PRJNA193544_S_NODE_752_length_280_cov_31.454183_g737_i0 PRJNA193544 752 280 31.454183 88.0717124 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 327 3.83e-85   NTclustered gi|478683563|gb|KC193096.1| 104777 g737 i0 88.603 87.0142857142857 272 27 96 4 1 269 25 295 Brachionus calyciflorus 28S ribosomal RNA gene, partial sequence blastn 24364 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
15082763 15082763 PRJNA193544_S_NODE_12_length_724_cov_5154.860432_g11_i0 PRJNA193544 12 724 5154.860432 37321.18952768 Adineta 104781 Rotifera other_Eukaryota 1199 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g11 i0 97.974 40.3466850828729 691 14 95 0 1 691 1500 2190 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 29211 1205 0.995020746887967 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15668686 15668686 PRJNA193544_S_NODE_193_length_404_cov_18.048000_g178_i0 PRJNA193544 193 404 18.048 72.91392 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 424 7.13e-114   NTclustered gi|83285184|gb|DQ297731.1| 104777 g178 i0 85.68 71.1311881188119 412 48 100 8 1 404 294 702 Brachionus calyciflorus 28S ribosomal RNA gene, partial sequence blastn 28737 424 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
18217581 18217581 PRJNA193544_S_NODE_1955_length_193_cov_21521.317073_g1940_i0 PRJNA193544 1955 193 21521.317073 41536.14195089 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 296 6.96e-76   NTclustered gi|307826866|gb|GU012717.1| 104777 g1940 i0 100 82.2331606217617 160 0 83 0 2 161 335 494 Brachionus calyciflorus isolate HN16 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15871 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
20181299 20181299 PRJNA193544_S_NODE_3276_length_154_cov_10.360000_g3261_i0 PRJNA193544 3276 154 10.36 15.9544 Opisthokonta 33154 Rotifera other_Eukaryota 272 8.91e-69   NTclustered gi|259129963|gb|GQ398061.1| 104782 g3261 i0 98.693 63 153 2 99 0 2 154 6640 6792 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 9702 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
24007209 24007209 PRJNA193544_S_NODE_1559_length_210_cov_681.414365_g1544_i0 PRJNA193544 1559 210 681.414365 1430.9701665 root 1 Root_unresolved Root_unresolved 289 1.29e-73   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g1544 i0 99.371 75.7142857142857 159 1 76 0 52 210 1113 955 Philodina acuticornis 18S rRNA gene blastn 15900 289 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
24007216 24007216 PRJNA193544_S_NODE_2059_length_189_cov_23.212500_g2044_i0 PRJNA193544 2059 189 23.2125 43.871625 Metazoa 33208 Rotifera other_Eukaryota 320 4.03e-83   NTclustered gi|37785582|gb|AY210469.1| 96448 g2044 i0 99.435 57.7619047619048 177 0 94 1 13 189 1761 1586 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 10917 322 0.993788819875776 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;