RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA193544" and tax_phylum = "Lenarviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA193544 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14394975 14394975 PRJNA193544_S_NODE_2232_length_183_cov_2.331169_g2217_i0 PRJNA193544 2232 183 2.331169 4.26603927 Psammomys obesus associated mitovirus 1 2993411 Viruses Viruses 320 3.87e-83   NTclustered gi|2431564465|tpg|BK062831.1| 2993411 g2217 i0 99.432 0.961748633879781 176 1 96 0 1 176 1687 1862 TPA_asm: Psammomys obesus associated mitovirus 1 RdRp gene, partial cds blastn 176 320 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Psammomys obesus associated mitovirus 1
22042500 22042500 PRJNA193544_S_NODE_1478_length_214_cov_19016.016216_g1463_i0 PRJNA193544 1478 214 19016.016216 40694.27470224 Ripadip virus 3130510 Viruses Viruses 195 2.96e-45   NTclustered gi|2717319943|gb|PP172812.1| 3130510 g1463 i0 89.172 25.8691588785047 157 15 73 2 59 214 4828 4673 MAG: Ripadip virus isolate KCAP1_k141_658204 genomic sequence blastn 5536 195 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripadip virus
31274603 31274603 PRJNA193544_S_NODE_2675_length_169_cov_4.264286_g2660_i0 PRJNA193544 2675 169 4.264286 7.20664334 Ripavand virus 3130066 Viruses Viruses 60.8 5.39e-9   NR WZH59198.1 3130066 g2660 i0 51.9 0.958579881656805 54 26 95.9 0 6 167 523 576 WZH59198.1 MAG: RNA-dependent RNA polymerase, partial [Ripavand virus] diamond 162 60.8 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripavand virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;