RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA193544" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA193544 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1055265 1055265 PRJNA193544_S_NODE_2581_length_172_cov_2.888112_g2566_i0 PRJNA193544 2581 172 2.888112 4.96755264 Mrakiaceae 1851551 Fungi Fungi 309 7.75e-80   NTclustered gi|506949109|dbj|AB727278.1| 82525 g2566 i0 100 96.3255813953488 167 0 97 0 6 172 532 366 Guehomyces pullulans gene for large subunit ribosomal RNA, partial sequence, strain: RSM26-12 blastn 16568 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Mrakiaceae Tausonia Tausonia pullulans
2330518 2330518 PRJNA193544_S_NODE_2202_length_183_cov_24870.863636_g2187_i0 PRJNA193544 2202 183 24870.863636 45513.68045388 Amanita 41955 Fungi Fungi 122 1.1699999999999997e-23   NTclustered gi|329131584|gb|HQ539780.1| 87326 g2187 i0 81.25 19.103825136612 160 22 84 7 1 154 672 829 Amanita brunnescens voucher BW_HP12 18S ribosomal RNA gene, partial sequence blastn 3496 122 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Amanitaceae Amanita Amanita brunnescens
5469259 5469259 PRJNA193544_S_NODE_985_length_252_cov_13.233184_g970_i0 PRJNA193544 985 252 13.233184 33.34762368 Lactarius leonis 194901 Fungi Fungi 106 1.73e-18   NTclustered gi|30840872|gb|AF506411.1| 194901 g970 i0 79.739 2.46428571428571 153 26 60 5 22 172 1656 1507 Lactarius leonis strain SJ91016 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 621 106 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Lactarius Lactarius leonis
6743578 6743578 PRJNA193544_S_NODE_3186_length_156_cov_15.480315_g3171_i0 PRJNA193544 3186 156 15.480315 24.1492914 Cryptococcus neoformans 5207 Fungi Fungi 93.5 7.57e-15   NTclustered gi|1031987672|gb|KU310555.1| 5207 g3171 i0 93.548 0.83974358974359 62 4 40 0 90 151 10 71 Cryptococcus neoformans isolate Cgu 1106 28S ribosomal RNA gene, partial sequence blastn 131 93.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
15668701 15668701 PRJNA193544_S_NODE_3273_length_154_cov_14.816000_g3258_i0 PRJNA193544 3273 154 14.816 22.81664 Peniophora piceae 55352 Fungi Fungi 113 5.72e-21   NTclustered gi|480326996|gb|JX507719.1| 55352 g3258 i0 80.892 53.7467532467532 157 19 99 11 3 154 1989 1839 Peniophora piceae isolate 209 large subunit ribosomal RNA gene, partial sequence blastn 8277 113 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Peniophoraceae Peniophora Peniophora piceae
17632867 17632867 PRJNA193544_S_NODE_2034_length_190_cov_11.124224_g2019_i0 PRJNA193544 2034 190 11.124224 21.1360256 Puccinia 5296 Fungi Fungi 62.1 2.71e-5   NTclustered gi|1804583978|gb|MN746374.1| 168172 g2019 i0 82.051 1.49473684210526 78 8 38 6 5 77 34681 34605 Puccinia striiformis f. sp. tritici strain DK0911 mitochondrion, complete genome blastn 284 62.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia striiformis
20767437 20767437 PRJNA193544_S_NODE_357_length_345_cov_14.914557_g342_i0 PRJNA193544 357 345 14.914557 51.45522165 uncultured Boletaceae 335445 Fungi Fungi 143 1.88e-29   NTclustered gi|134021986|gb|EF023336.1| 335445 g342 i0 81.977 46.8260869565217 172 27 49 3 174 342 171 1 Uncultured Boletaceae clone Amb_18S_657 18S ribosomal RNA gene, partial sequence blastn 16155 143 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Boletaceae   uncultured Boletaceae
26662126 26662126 PRJNA193544_S_NODE_1141_length_239_cov_5.390476_g1126_i0 PRJNA193544 1141 239 5.390476 12.88323764 Tremella mesenterica DSM 1558 578456 Fungi Fungi 50.4 2.5e-5   NR EIW67481.1 578456 g1126 i0 63.9 0.451882845188285 36 13 45.2 0 122 229 125 160 EIW67481.1 hypothetical protein TREMEDRAFT_33574 [Tremella mesenterica DSM 1558] diamond 108 50.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae Tremella Tremella mesenterica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;