contig_metadata
21 rows where bioproject = "PRJNA193544", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1055264 | 1055264 | PRJNA193544_S_NODE_2541_length_173_cov_17.076389_g2526_i0 | PRJNA193544 | 2541 | 173 | 17.076389 | 29.54215297 | Terriglobia | 204432 | Bacteria | Bacteria | 226 | 8.089999999999997e-55 | NTclustered | gi|2874253796|emb|OY969780.1| | 194844 | g2526 | i0 | 90.173 | 506.924855491329 | 173 | 17 | 100 | 0 | 1 | 173 | 286354 | 286526 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 | blastn | 87698 | 226 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 1640677 | 1640677 | PRJNA193544_S_NODE_282_length_364_cov_15.665672_g267_i0 | PRJNA193544 | 282 | 364 | 15.665672 | 57.02304608 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 468 | 2.89e-127 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g267 | i0 | 89.863 | 55.9423076923077 | 365 | 35 | 100 | 2 | 1 | 364 | 4232309 | 4232672 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 20363 | 468 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 2916556 | 2916556 | PRJNA193544_S_NODE_2543_length_173_cov_14.805556_g2528_i0 | PRJNA193544 | 2543 | 173 | 14.805556 | 25.61361188 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 213 | 6.3e-51 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g2528 | i0 | 90.625 | 77.7398843930636 | 160 | 15 | 92 | 0 | 3 | 162 | 4648726 | 4648885 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 13449 | 213 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 4193001 | 4193001 | PRJNA193544_S_NODE_504_length_316_cov_146.843206_g489_i0 | PRJNA193544 | 504 | 316 | 146.843206 | 464.02453096 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 370 | 7.19e-98 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g489 | i0 | 91.76 | 146.237341772152 | 267 | 21 | 84 | 1 | 51 | 316 | 4649793 | 4649527 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 46211 | 370 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 5469205 | 5469205 | PRJNA193544_S_NODE_1525_length_212_cov_70.010929_g1510_i0 | PRJNA193544 | 1525 | 212 | 70.010929 | 148.42316948 | Geothrix sp. PMB-07 | 3068640 | Bacteria | Bacteria | 339 | 1.28e-88 | NTclustered | gi|2563347696|gb|CP132333.1| | 3068640 | g1510 | i0 | 96.569 | 259.768867924528 | 204 | 7 | 96 | 0 | 1 | 204 | 1426297 | 1426500 | Geothrix sp. PMB-07 chromosome, complete genome | blastn | 55071 | 339 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. PMB-07 | ||
| 6743532 | 6743532 | PRJNA193544_S_NODE_1046_length_247_cov_15.284404_g1031_i0 | PRJNA193544 | 1046 | 247 | 15.284404 | 37.75247788 | Geothrix sp. 21YS21S-2 | 3068893 | Bacteria | Bacteria | 368 | 1.95e-97 | NTclustered | gi|2566094019|gb|CP132910.1| | 3068893 | g1031 | i0 | 95.633 | 539.024291497976 | 229 | 10 | 93 | 0 | 19 | 247 | 221365 | 221137 | Geothrix sp. 21YS21S-2 chromosome, complete genome | blastn | 133139 | 368 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. 21YS21S-2 | ||
| 8019269 | 8019269 | PRJNA193544_S_NODE_2607_length_171_cov_6.126761_g2592_i0 | PRJNA193544 | 2607 | 171 | 6.126761 | 10.47676131 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 117 | 5.01e-22 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g2592 | i0 | 80.745 | 2.01754385964912 | 161 | 21 | 91 | 10 | 17 | 171 | 4650024 | 4649868 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 345 | 117 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 8019271 | 8019271 | PRJNA193544_S_NODE_2867_length_163_cov_42.208955_g2852_i0 | PRJNA193544 | 2867 | 163 | 42.208955 | 68.80059665 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 241 | 2.7000000000000008e-59 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g2852 | i0 | 93.75 | 204.361963190184 | 160 | 10 | 98 | 0 | 1 | 160 | 4649397 | 4649556 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 33311 | 241 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 8019273 | 8019273 | PRJNA193544_S_NODE_3227_length_155_cov_15.444444_g3212_i0 | PRJNA193544 | 3227 | 155 | 15.444444 | 23.9388882 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 193 | 7.2e-45 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g3212 | i0 | 89.241 | 290.703225806452 | 158 | 12 | 99 | 3 | 2 | 155 | 4648511 | 4648667 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 45059 | 193 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 9294001 | 9294001 | PRJNA193544_S_NODE_788_length_274_cov_5.073469_g773_i0 | PRJNA193544 | 788 | 274 | 5.073469 | 13.90130506 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 375 | 1.3099999999999998e-99 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g773 | i0 | 91.822 | 118.368613138686 | 269 | 22 | 98 | 0 | 1 | 269 | 3556653 | 3556385 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 32433 | 375 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 11258440 | 11258440 | PRJNA193544_S_NODE_1209_length_233_cov_21.436275_g1194_i0 | PRJNA193544 | 1209 | 233 | 21.436275 | 49.94652075 | Geothrix | 44675 | Bacteria | Bacteria | 414 | 2.3099999999999998e-111 | NTclustered | gi|2515262989|gb|CP126625.1| | 1962974 | g1194 | i0 | 98.712 | 109.309012875536 | 233 | 3 | 100 | 0 | 1 | 233 | 1294086 | 1294318 | MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome | blastn | 25469 | 414 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 11844472 | 11844472 | PRJNA193544_S_NODE_350_length_347_cov_102.751572_g335_i0 | PRJNA193544 | 350 | 347 | 102.751572 | 356.54795484 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 584 | 2.6199999999999987e-162 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g335 | i0 | 97.118 | 109 | 347 | 9 | 99 | 1 | 1 | 346 | 4232026 | 4231680 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 37823 | 584 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 12533892 | 12533892 | PRJNA193544_S_NODE_630_length_297_cov_14.511194_g615_i0 | PRJNA193544 | 630 | 297 | 14.511194 | 43.09824618 | Holophagaceae | 574976 | Bacteria | Bacteria | 544 | 3.7299999999999996e-150 | NTclustered | gi|84452196|emb|AM180894.1| | 44676 | g615 | i0 | 99.663 | 167.208754208754 | 297 | 1 | 100 | 0 | 1 | 297 | 1199 | 903 | Geothrix fermentans partial 23S rRNA gene, strain DSM 14018 | blastn | 49661 | 549 | 0.990892531876138 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix fermentans | ||
| 13119676 | 13119676 | PRJNA193544_S_NODE_251_length_374_cov_25.507246_g236_i0 | PRJNA193544 | 251 | 374 | 25.507246 | 95.39710004 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 401 | 3.069999999999999e-107 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g236 | i0 | 86.17 | 716.516042780749 | 376 | 47 | 99 | 5 | 1 | 372 | 4233490 | 4233864 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 267977 | 401 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 15668680 | 15668680 | PRJNA193544_S_NODE_1793_length_200_cov_26.783626_g1778_i0 | PRJNA193544 | 1793 | 200 | 26.783626 | 53.567252 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 326 | 9.27e-85 | NTclustered | gi|117557513|emb|AM180902.2| | 171953 | g1778 | i0 | 96 | 117 | 200 | 8 | 100 | 0 | 1 | 200 | 368 | 169 | Uncultured Acidobacteria bacterium partial 23S rRNA gene, clone ZC6 | blastn | 23400 | 326 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 15668696 | 15668696 | PRJNA193544_S_NODE_2833_length_164_cov_30.088889_g2818_i0 | PRJNA193544 | 2833 | 164 | 30.088889000000002 | 49.34577796 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 270 | 3.4699999999999992e-68 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g2818 | i0 | 96.894 | 273.658536585366 | 161 | 5 | 98 | 0 | 4 | 164 | 4652233 | 4652073 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 44880 | 270 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 15668697 | 15668697 | PRJNA193544_S_NODE_293_length_361_cov_26.996988_g278_i0 | PRJNA193544 | 293 | 361 | 26.996988 | 97.45912668 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 348 | 3.9e-91 | NTclustered | gi|1015624362|gb|AH012920.2| | 171953 | g278 | i0 | 84.341 | 85.1246537396122 | 364 | 48 | 99 | 8 | 2 | 361 | 29317 | 29675 | Uncultured Acidobacteria bacterium clone 46h5 hypothetical protein, putative O-linked GlcNAc transferase, putative two-component response regulator, hypothetical protein, putative penicillin-resistance DD-carboxypeptidase, putative glycosyl transferase, hypothetical protein, conserved hypothetical protein, hypothetical protein, putative MaoC family dehydratase, putative D-3-phosphoglycerate dehydrogenase, putative magnesium and cobalt transport protein, putative phosphatidyl-glycerophosphatase, putative 2-methylthioadenine synthetase, hypothetical protein, putative glutamine cyclotransferase, and hypothetical protein genes, complete cds; 5S ribosomal RNA, 23S ribosomal RNA, tRNA-Ala, tRNA-Met, tRNA-Ile, and 16S ribosomal RNA genes, complete sequence; and hypothetical protein genes, complete cds | blastn | 30730 | 348 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 19491865 | 19491865 | PRJNA193544_S_NODE_156_length_421_cov_9380.061224_g142_i0 | PRJNA193544 | 156 | 421 | 9380.061224 | 39490.05775304 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 433 | 1.2399999999999998e-116 | NTclustered | gi|1015624362|gb|AH012920.2| | 171953 | g142 | i0 | 95.588 | 118.70783847981 | 272 | 8 | 64 | 4 | 152 | 421 | 30789 | 31058 | Uncultured Acidobacteria bacterium clone 46h5 hypothetical protein, putative O-linked GlcNAc transferase, putative two-component response regulator, hypothetical protein, putative penicillin-resistance DD-carboxypeptidase, putative glycosyl transferase, hypothetical protein, conserved hypothetical protein, hypothetical protein, putative MaoC family dehydratase, putative D-3-phosphoglycerate dehydrogenase, putative magnesium and cobalt transport protein, putative phosphatidyl-glycerophosphatase, putative 2-methylthioadenine synthetase, hypothetical protein, putative glutamine cyclotransferase, and hypothetical protein genes, complete cds; 5S ribosomal RNA, 23S ribosomal RNA, tRNA-Ala, tRNA-Met, tRNA-Ile, and 16S ribosomal RNA genes, complete sequence; and hypothetical protein genes, complete cds | blastn | 49976 | 433 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 22042553 | 22042553 | PRJNA193544_S_NODE_938_length_257_cov_14.973684_g923_i0 | PRJNA193544 | 938 | 257 | 14.973684 | 38.48236788 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 305 | 1.63e-78 | NTclustered | gi|2874254027|emb|OY970352.1| | 171953 | g923 | i0 | 88.627 | 91.7665369649805 | 255 | 23 | 98 | 6 | 5 | 257 | 2366993 | 2367243 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 | blastn | 23584 | 305 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24007235 | 24007235 | PRJNA193544_S_NODE_819_length_270_cov_15985.240664_g804_i0 | PRJNA193544 | 819 | 270 | 15985.240664 | 43160.1497928 | Geothrix | 44675 | Bacteria | Bacteria | 427 | 3.5199999999999993e-115 | NTclustered | gi|84452196|emb|AM180894.1| | 44676 | g804 | i0 | 99.156 | 94.5037037037037 | 237 | 2 | 88 | 0 | 34 | 270 | 1405 | 1169 | Geothrix fermentans partial 23S rRNA gene, strain DSM 14018 | blastn | 25516 | 427 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix fermentans | ||
| 28842274 | 28842274 | PRJNA193544_S_NODE_2928_length_162_cov_2.827068_g2913_i0 | PRJNA193544 | 2928 | 162 | 2.827068 | 4.57985016 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 58.2 | 1.1e-9 | NR | MBI3423676.1 | 1978231 | g2913 | i0 | 83.9 | 0.574074074074074 | 31 | 5 | 57.4 | 0 | 98 | 6 | 3 | 33 | MBI3423676.1 Flp family type IVb pilin [Acidobacteriota bacterium] | diamond | 93 | 58.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;