contig_metadata
12 rows where bioproject = "PRJNA193544", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6157965 | 6157965 | PRJNA193544_S_NODE_2345_length_179_cov_25.766667_g2330_i0 | PRJNA193544 | 2345 | 179 | 25.766667 | 46.12233393 | Megalodesulfovibrio | 2910978 | Bacteria | Bacteria | 220 | 3.93e-53 | NTclustered | gi|662020060|ref|NR_121947.1| | 879 | g2330 | i0 | 89.714 | 277.061452513966 | 175 | 15 | 97 | 3 | 1 | 174 | 662 | 834 | Desulfovibrio gigas strain DSM 1382 23S ribosomal RNA gene, complete sequence | blastn | 49594 | 220 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Megalodesulfovibrio | Megalodesulfovibrio gigas | ||
| 6743538 | 6743538 | PRJNA193544_S_NODE_1206_length_233_cov_29.661765_g1191_i0 | PRJNA193544 | 1206 | 233 | 29.661765 | 69.11191245 | Desulfarculia bacterium | 3065862 | Bacteria | Bacteria | 117 | 7.290000000000001e-22 | NTclustered | gi|2621702698|emb|OY759590.1| | 3065862 | g1191 | i0 | 97.101 | 275.918454935622 | 69 | 2 | 30 | 0 | 164 | 232 | 336960 | 336892 | MAG: Desulfarculia bacterium isolate 49400898-fc5b-42b7-bef8-a303f8702bb8 genome assembly, chromosome: 1 | blastn | 64289 | 117 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculia bacterium | |||||
| 8019291 | 8019291 | PRJNA193544_S_NODE_827_length_269_cov_43.854167_g812_i0 | PRJNA193544 | 827 | 269 | 43.854167 | 117.96770923 | Desulfovibrio aminophilus | 81425 | Bacteria | Bacteria | 241 | 4.900000000000001e-59 | NTclustered | gi|2908463109|gb|CP168306.1| | 81425 | g812 | i0 | 83.026 | 430.553903345725 | 271 | 41 | 100 | 5 | 1 | 269 | 222382 | 222115 | MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome | blastn | 115819 | 241 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 8707969 | 8707969 | PRJNA193544_S_NODE_1827_length_199_cov_12.823529_g1812_i0 | PRJNA193544 | 1827 | 199 | 12.823529 | 25.51882271 | Desulfovibrionaceae | 194924 | Bacteria | Bacteria | 250 | 5.71e-62 | NTclustered | gi|662020060|ref|NR_121947.1| | 879 | g1812 | i0 | 90.206 | 238.537688442211 | 194 | 15 | 96 | 4 | 2 | 192 | 806 | 998 | Desulfovibrio gigas strain DSM 1382 23S ribosomal RNA gene, complete sequence | blastn | 47469 | 250 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Megalodesulfovibrio | Megalodesulfovibrio gigas | ||
| 11844473 | 11844473 | PRJNA193544_S_NODE_390_length_337_cov_12687.214286_g375_i0 | PRJNA193544 | 390 | 337 | 12687.214286 | 42755.91214382 | Desulfolutivibrio sulfoxidireducens | 2773299 | Bacteria | Bacteria | 433 | 9.72e-117 | NTclustered | gi|1863429635|gb|CP045508.1| | 2773299 | g375 | i0 | 92.409 | 204.017804154303 | 303 | 23 | 90 | 0 | 2 | 304 | 613881 | 614183 | Desulfolutivibrio sulfoxidireducens strain DSM 107105 chromosome, complete genome | blastn | 68754 | 433 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfolutivibrio | Desulfolutivibrio sulfoxidireducens | ||
| 13119701 | 13119701 | PRJNA193544_S_NODE_851_length_266_cov_10.092827_g836_i0 | PRJNA193544 | 851 | 266 | 10.092827 | 26.84691982 | Desulfovibrio desulfuricans | 876 | Bacteria | Bacteria | 464 | 2.64e-126 | NTclustered | gi|1621566608|gb|CP036295.1| | 876 | g836 | i0 | 98.12 | 113.890977443609 | 266 | 5 | 100 | 0 | 1 | 266 | 494447 | 494712 | Desulfovibrio desulfuricans strain IC1 chromosome, complete genome | blastn | 30295 | 464 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio desulfuricans | ||
| 14394953 | 14394953 | PRJNA193544_S_NODE_1332_length_223_cov_3.484536_g1317_i0 | PRJNA193544 | 1332 | 223 | 3.484536 | 7.77051528 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 86.1 | 1.95e-12 | NTclustered | gi|2621705002|emb|OY762289.1| | 2049043 | g1317 | i0 | 94.545 | 41.390134529148 | 55 | 3 | 25 | 0 | 1 | 55 | 714057 | 714003 | MAG: Desulfovibrionaceae bacterium isolate 1e2121d5-5174-4668-bae3-9852897706ae genome assembly, chromosome: 1 | blastn | 9230 | 86.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium | |||
| 15668700 | 15668700 | PRJNA193544_S_NODE_3153_length_157_cov_3.820312_g3138_i0 | PRJNA193544 | 3153 | 157 | 3.820312 | 5.99788984 | uncultured Desulfovibrio sp. | 167968 | Bacteria | Bacteria | 252 | 1.19e-62 | NTclustered | gi|1206269521|emb|LT841588.1| | 167968 | g3138 | i0 | 95.541 | 99.8980891719745 | 157 | 7 | 100 | 0 | 1 | 157 | 30 | 186 | Uncultured Desulfovibrio sp. partial 16S rRNA gene, isolate BACT_OTU_2389 | blastn | 15684 | 252 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | uncultured Desulfovibrio sp. | ||
| 16357652 | 16357652 | PRJNA193544_S_NODE_1673_length_204_cov_22859.611429_g1658_i0 | PRJNA193544 | 1673 | 204 | 22859.611429 | 46633.60731516 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 311 | 2.66e-80 | NTclustered | gi|2418936308|gb|OQ154933.1| | 876 | g1658 | i0 | 99.415 | 83.8235294117647 | 171 | 1 | 84 | 0 | 1 | 171 | 286 | 456 | Desulfovibrio desulfuricans strain JN-38 16S ribosomal RNA gene, partial sequence | blastn | 17100 | 311 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio desulfuricans | ||
| 16943156 | 16943156 | PRJNA193544_S_NODE_2074_length_188_cov_23091.484277_g2059_i0 | PRJNA193544 | 2074 | 188 | 23091.484277 | 43411.99044076 | Pseudodesulfovibrio tunisiensis | 463192 | Bacteria | Bacteria | 141 | 3.34e-29 | NTclustered | gi|2215688239|gb|CP094380.1| | 463192 | g2059 | i0 | 83.333 | 36.8829787234043 | 156 | 23 | 82 | 3 | 35 | 188 | 1160691 | 1160845 | Pseudodesulfovibrio tunisiensis strain RB22 chromosome, complete genome | blastn | 6934 | 141 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio tunisiensis | ||
| 18217603 | 18217603 | PRJNA193544_S_NODE_375_length_342_cov_7.958466_g360_i0 | PRJNA193544 | 375 | 342 | 7.958466 | 27.21795372 | Desulfolutivibrio sulfodismutans | 63561 | Bacteria | Bacteria | 307 | 6.250000000000001e-79 | NTclustered | gi|1863422180|gb|CP045504.1| | 1121464 | g360 | i0 | 85.714 | 169.891812865497 | 301 | 32 | 86 | 9 | 41 | 334 | 1153466 | 1153762 | Desulfolutivibrio sulfodismutans DSM 3696 chromosome, complete genome | blastn | 58103 | 307 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfolutivibrio | Desulfolutivibrio sulfodismutans | ||
| 22042495 | 22042495 | PRJNA193544_S_NODE_1378_length_220_cov_14.434555_g1363_i0 | PRJNA193544 | 1378 | 220 | 14.434555 | 31.756021 | Syntrophorhabdaceae bacterium | 2660714 | Bacteria | Bacteria | 180 | 8.57e-41 | NTclustered | gi|2621704922|emb|OY762209.1| | 2660714 | g1363 | i0 | 87.421 | 104.868181818182 | 159 | 16 | 71 | 4 | 64 | 220 | 3510072 | 3510228 | MAG: Syntrophorhabdaceae bacterium isolate b67c53bf-795e-48b1-b0c8-2f1cb1e3683a genome assembly, chromosome: 1 | blastn | 23071 | 180 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophorhabdia | Syntrophorhabdales | Syntrophorhabdaceae | Syntrophorhabdaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;