contig_metadata
12 rows where bioproject = "PRJNA193544", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 365869 | 365869 | PRJNA193544_S_NODE_1641_length_206_cov_5.367232_g1626_i0 | PRJNA193544 | 1641 | 206 | 5.367232 | 11.05649792 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 219 | 1.68e-52 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g1626 | i0 | 85.99 | 82 | 207 | 26 | 100 | 3 | 1 | 206 | 3446991 | 3447195 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 16892 | 219 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 4192973 | 4192973 | PRJNA193544_S_NODE_1744_length_202_cov_5.699422_g1729_i0 | PRJNA193544 | 1744 | 202 | 5.699422 | 11.51283244 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 248 | 2.09e-61 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g1729 | i0 | 90.86 | 84.1683168316832 | 186 | 15 | 91 | 1 | 1 | 184 | 666907 | 667092 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 17002 | 248 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 10569947 | 10569947 | PRJNA193544_S_NODE_1469_length_215_cov_8.069892_g1454_i0 | PRJNA193544 | 1469 | 215 | 8.069892 | 17.3502678 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 185 | 1.79e-42 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g1454 | i0 | 82.569 | 71.6558139534884 | 218 | 30 | 99 | 7 | 2 | 215 | 3448075 | 3448288 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 15406 | 185 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 11258436 | 11258436 | PRJNA193544_S_NODE_1089_length_243_cov_18605.640187_g1074_i0 | PRJNA193544 | 1089 | 243 | 18605.640187 | 45211.70565441 | Bdellovibrio | 958 | Bacteria | Bacteria | 320 | 5.44e-83 | NTclustered | gi|2771112236|gb|CP160486.1| | 959 | g1074 | i0 | 94.286 | 79.0041152263374 | 210 | 10 | 86 | 2 | 2 | 210 | 821710 | 821918 | Bdellovibrio bacteriovorus strain MHI39 chromosome | blastn | 19198 | 320 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 11844464 | 11844464 | PRJNA193544_S_NODE_270_length_367_cov_1748.171598_g255_i0 | PRJNA193544 | 270 | 367 | 1748.171598 | 6415.78976466 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 388 | 2.3399999999999996e-103 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g255 | i0 | 92.62 | 175.983651226158 | 271 | 19 | 74 | 1 | 12 | 281 | 666229 | 666499 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 64586 | 388 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 15082771 | 15082771 | PRJNA193544_S_NODE_1712_length_203_cov_10.327586_g1697_i0 | PRJNA193544 | 1712 | 203 | 10.327586 | 20.96499958 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 248 | 2.1e-61 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g1697 | i0 | 89.744 | 241.955665024631 | 195 | 18 | 96 | 2 | 10 | 203 | 2271 | 2078 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 49117 | 248 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 15668691 | 15668691 | PRJNA193544_S_NODE_2473_length_175_cov_68.157534_g2458_i0 | PRJNA193544 | 2473 | 175 | 68.157534 | 119.2756845 | Fluviispira sanaruensis | 2493639 | Bacteria | Bacteria | 263 | 6.26e-66 | NTclustered | gi|1566193515|dbj|AP019368.1| | 2493639 | g2458 | i0 | 93.75 | 240.708571428571 | 176 | 9 | 100 | 2 | 1 | 175 | 401052 | 400878 | Silvanigrellales bacterium RF1110005 DNA, complete genome | blastn | 42124 | 263 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Fluviispira | Fluviispira sanaruensis | ||
| 16357669 | 16357669 | PRJNA193544_S_NODE_313_length_357_cov_14.777439_g298_i0 | PRJNA193544 | 313 | 357 | 14.777439 | 52.75545723 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 431 | 3.719999999999999e-116 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g298 | i0 | 91.562 | 90.0364145658263 | 320 | 15 | 88 | 10 | 12 | 326 | 1864 | 1552 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 32143 | 431 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 16943128 | 16943128 | PRJNA193544_S_NODE_1034_length_248_cov_21.100457_g1019_i0 | PRJNA193544 | 1034 | 248 | 21.100457 | 52.32913336 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 344 | 3.299999999999999e-90 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g1019 | i0 | 93.191 | 78.0161290322581 | 235 | 14 | 94 | 2 | 1 | 233 | 700052 | 700286 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 19348 | 344 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 16943158 | 16943158 | PRJNA193544_S_NODE_2134_length_186_cov_18.649682_g2119_i0 | PRJNA193544 | 2134 | 186 | 18.649682 | 34.68840852 | Fluviispira sanaruensis | 2493639 | Bacteria | Bacteria | 215 | 1.92e-51 | NTclustered | gi|1566193515|dbj|AP019368.1| | 2493639 | g2119 | i0 | 88.043 | 391.424731182796 | 184 | 18 | 98 | 4 | 5 | 186 | 2373209 | 2373028 | Silvanigrellales bacterium RF1110005 DNA, complete genome | blastn | 72805 | 215 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Fluviispira | Fluviispira sanaruensis | ||
| 20767449 | 20767449 | PRJNA193544_S_NODE_897_length_260_cov_2562.865801_g882_i0 | PRJNA193544 | 897 | 260 | 2562.865801 | 6663.4510826 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 289 | 1.66e-73 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g882 | i0 | 96.552 | 109.961538461538 | 174 | 6 | 67 | 0 | 1 | 174 | 666326 | 666499 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 28590 | 289 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 21457002 | 21457002 | PRJNA193544_S_NODE_2017_length_191_cov_10.833333_g2002_i0 | PRJNA193544 | 2017 | 191 | 10.833333 | 20.69166603 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 342 | 8.699999999999999e-90 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g2002 | i0 | 98.958 | 150.219895287958 | 192 | 1 | 100 | 1 | 1 | 191 | 859 | 668 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 28692 | 342 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;