contig_metadata
5 rows where bioproject = "PRJNA193544", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1640692 | 1640692 | PRJNA193544_S_NODE_442_length_328_cov_4.354515_g427_i0 | PRJNA193544 | 442 | 328 | 4.354515 | 14.2828092 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 289 | 2.16e-73 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g427 | i0 | 82.727 | 108.496951219512 | 330 | 52 | 99 | 5 | 1 | 327 | 13483 | 13810 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 35587 | 289 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 4192985 | 4192985 | PRJNA193544_S_NODE_2404_length_177_cov_23.371622_g2389_i0 | PRJNA193544 | 2404 | 177 | 23.371622 | 41.36777094 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 145 | 2.4e-30 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g2389 | i0 | 81.564 | 129.813559322034 | 179 | 29 | 100 | 4 | 1 | 177 | 14248 | 14424 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 22977 | 145 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 13808640 | 13808640 | PRJNA193544_S_NODE_1611_length_207_cov_56.870787_g1596_i0 | PRJNA193544 | 1611 | 207 | 56.870787 | 117.72252909 | Bacteria | 2 | Bacteria | Bacteria | 333 | 5.779999999999999e-87 | NTclustered | gi|588481665|gb|KF956460.1| | 34034 | g1596 | i0 | 95.652 | 99.1835748792271 | 207 | 9 | 100 | 0 | 1 | 207 | 523 | 317 | Uncultured delta proteobacterium clone NS-OTU31 16S ribosomal RNA gene, partial sequence | blastn | 20531 | 333 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 15082769 | 15082769 | PRJNA193544_S_NODE_1612_length_207_cov_50.382022_g1597_i0 | PRJNA193544 | 1612 | 207 | 50.382022 | 104.29078554 | Byssovorax | 224459 | Bacteria | Bacteria | 327 | 2.69e-85 | NTclustered | gi|219962346|gb|FJ569886.1| | 34034 | g1597 | i0 | 95.169 | 100.149758454106 | 207 | 10 | 100 | 0 | 1 | 207 | 87 | 293 | Uncultured delta proteobacterium clone A5YC14RM small subunit ribosomal RNA gene, partial sequence | blastn | 20731 | 327 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 18906690 | 18906690 | PRJNA193544_S_NODE_2115_length_187_cov_32.886076_g2100_i0 | PRJNA193544 | 2115 | 187 | 32.886076 | 61.49696212 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 281 | 1.8800000000000002e-71 | NTclustered | gi|339958901|gb|JN015508.1| | 34034 | g2100 | i0 | 97.576 | 87.5454545454545 | 165 | 2 | 87 | 2 | 25 | 187 | 670 | 506 | Uncultured delta proteobacterium clone ZBP-1 16S ribosomal RNA gene, partial sequence | blastn | 16371 | 281 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;