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contig_metadata

21 rows where bioproject = "PRJNA193544", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 21 ✖

tax_clade 1

  • Sar · 21 ✖

bioproject 1

  • PRJNA193544 · 21 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2330516 2330516 PRJNA193544_S_NODE_2102_length_187_cov_23479.088608_g2087_i0 PRJNA193544 2102 187 23479.088608 43905.89569696 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 200 5.4e-47   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2087 i0 90.323 101.288770053476 155 11 82 3 1 154 3255 3406 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 18941 200 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
2330531 2330531 PRJNA193544_S_NODE_3182_length_156_cov_22.314961_g3167_i0 PRJNA193544 3182 156 22.314961 34.81133916 root 1 Root_unresolved Root_unresolved 267 4.2199999999999997e-67   NTclustered gi|238617605|gb|FJ973380.1| 45107 g3167 i0 98.039 50.0576923076923 153 3 98 0 4 156 2311 2159 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 7809 267 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
2916541 2916541 PRJNA193544_S_NODE_1903_length_195_cov_22020.174699_g1888_i0 PRJNA193544 1903 195 22020.174699 42939.34066305 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 259 9.25e-65   NTclustered gi|88792583|gb|DQ386164.1| 372086 g1888 i0 95.122 203.692307692308 164 8 84 0 32 195 2653 2490 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 39720 259 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
2916557 2916557 PRJNA193544_S_NODE_263_length_369_cov_55.985294_g248_i0 PRJNA193544 263 369 55.985294 206.58573486 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 422 2.32e-113   NTclustered gi|88792583|gb|DQ386164.1| 372086 g248 i0 90.966 75.8644986449865 321 17 87 7 49 369 1882 1574 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 27994 422 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
4192965 4192965 PRJNA193544_S_NODE_1464_length_215_cov_17.086022_g1449_i0 PRJNA193544 1464 215 17.086022 36.7349473 Mesofila limnetica 1979842 SAR_Eukaryotes SAR_Eukaryotes 161 3.02e-35   NTclustered gi|88792585|gb|DQ386166.1| 1979842 g1449 i0 81.281 98.6790697674419 203 35 93 3 14 214 1688 1889 Dimorpha-like sp. ATCC 50522 28S ribosomal RNA gene, partial sequence blastn 21216 161 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila limnetica
5469232 5469232 PRJNA193544_S_NODE_265_length_369_cov_33.717647_g250_i0 PRJNA193544 265 369 33.717647 124.41811743 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 361 5.13e-95   NTclustered gi|88792583|gb|DQ386164.1| 372086 g250 i0 87.539 87.7127371273713 321 28 87 7 1 321 1574 1882 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 32366 361 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
8019259 8019259 PRJNA193544_S_NODE_2167_length_184_cov_24808.858065_g2152_i0 PRJNA193544 2167 184 24808.858065 45648.2988396 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 220 4.06e-53   NTclustered gi|88792583|gb|DQ386164.1| 372086 g2152 i0 92.763 0.826086956521739 152 11 83 0 1 152 2038 2189 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 152 220 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
8707963 8707963 PRJNA193544_S_NODE_1487_length_214_cov_64.464865_g1472_i0 PRJNA193544 1487 214 64.464865 137.9548111 Lecythium 238772 SAR_Eukaryotes SAR_Eukaryotes 381 2.1199999999999995e-101   NTclustered gi|49356806|gb|AY605210.1| 175275 g1472 i0 99.522 98.2242990654206 209 1 98 0 6 214 637 429 Uncultured cercozoan clone Sey075 small subunit ribosomal RNA gene, partial sequence blastn 21020 381 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
8707965 8707965 PRJNA193544_S_NODE_1647_length_205_cov_21988.511364_g1632_i0 PRJNA193544 1647 205 21988.511364 45076.4482962 Lecythium 238772 SAR_Eukaryotes SAR_Eukaryotes 302 1.61e-77   NTclustered gi|49356806|gb|AY605210.1| 175275 g1632 i0 98.256 83.7951219512195 172 3 84 0 34 205 447 276 Uncultured cercozoan clone Sey075 small subunit ribosomal RNA gene, partial sequence blastn 17178 302 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
9983280 9983280 PRJNA193544_S_NODE_2008_length_191_cov_844.049383_g1993_i0 PRJNA193544 2008 191 844.049383 1612.13432153 Chlamydophryidae 862251 SAR_Eukaryotes SAR_Eukaryotes 259 9.02e-65   NTclustered gi|1198038655|gb|KX580622.1| 2004638 g1993 i0 97.368 79.0890052356021 152 4 80 0 25 176 347 196 Lecythium jennyae strain KD1014 18S ribosomal RNA gene, partial sequence blastn 15106 259 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium jennyae
10569969 10569969 PRJNA193544_S_NODE_2769_length_166_cov_3.934307_g2754_i0 PRJNA193544 2769 166 3.934307 6.53094962 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 196 6.069999999999999e-46   NTclustered gi|161015705|gb|EF681939.1| 458867 g2754 i0 88.024 3.01807228915663 167 18 100 2 1 166 507 342 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 501 196 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
10569992 10569992 PRJNA193544_S_NODE_829_length_268_cov_2597.523013_g814_i0 PRJNA193544 829 268 2597.523013 6961.36167484 Cercozoa sp. CC-2009d 629762 SAR_Eukaryotes SAR_Eukaryotes 84.2 8.7e-12   NTclustered gi|290760487|gb|GQ144690.1| 629762 g814 i0 73.991 26.9514925373134 223 50 81 6 51 268 2316 2097 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 7223 84.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
11844441 11844441 PRJNA193544_S_NODE_1770_length_201_cov_8.750000_g1755_i0 PRJNA193544 1770 201 8.75 17.5875 uncultured Endomyxa 1821257 SAR_Eukaryotes SAR_Eukaryotes 115 2.2e-21   NTclustered gi|2915662025|gb|PV134890.1| 1821257 g1755 i0 80.921 3.02487562189055 152 24 75 5 52 201 5917 5769 Uncultured Endomyxa isolate IOM_2014_24 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 608 115 1 Eukaryota Sar   Cercozoa         uncultured Endomyxa
11844446 11844446 PRJNA193544_S_NODE_1950_length_193_cov_23542.737805_g1935_i0 PRJNA193544 1950 193 23542.737805 45437.48396365 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 150 5.74e-32   NTclustered gi|238617604|gb|FJ973379.1| 646463 g1935 i0 90.991 49.2487046632124 111 10 58 0 83 193 431 321 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 9505 150 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
15668689 15668689 PRJNA193544_S_NODE_2193_length_184_cov_4.922581_g2178_i0 PRJNA193544 2193 184 4.922581 9.05754904 Cercomonas sp. HFCC549 458874 SAR_Eukaryotes SAR_Eukaryotes 322 1.08e-83   NTclustered gi|161015714|gb|EF681948.1| 458874 g2178 i0 100 9.21195652173913 174 0 95 0 11 184 356 529 Cercomonas sp. HFCC549 28S ribosomal RNA gene, partial sequence blastn 1695 322 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC549
16943185 16943185 PRJNA193544_S_NODE_614_length_299_cov_51.377778_g599_i0 PRJNA193544 614 299 51.377778 153.61955622 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 309 1.49e-79   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g599 i0 88.39 72.3612040133779 267 18 89 6 1 267 3663 3916 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 21636 309 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18217588 18217588 PRJNA193544_S_NODE_2375_length_178_cov_53.986577_g2360_i0 PRJNA193544 2375 178 53.986577 96.09610706 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 318 1.34e-82   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2360 i0 98.876 100.35393258427 178 2 100 0 1 178 1016 839 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 17863 318 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
18906692 18906692 PRJNA193544_S_NODE_2195_length_184_cov_3.954839_g2180_i0 PRJNA193544 2195 184 3.954839 7.27690376 Cercomonas 45109 SAR_Eukaryotes SAR_Eukaryotes 147 7.0000000000000015e-31   NTclustered gi|223047882|gb|FJ032646.1| 595691 g2180 i0 81.72 100.516304347826 186 25 100 8 1 184 1754 1932 Cercomonadida sp. C15_1A03 28S ribosomal RNA gene, partial sequence blastn 18495 147 1 Eukaryota Sar   Cercozoa   Cercomonadida     Cercomonadida sp. C15_1A03
19491898 19491898 PRJNA193544_S_NODE_3396_length_152_cov_5.252033_g3381_i0 PRJNA193544 3396 152 5.252033 7.98309016 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 143 7.17e-30   NTclustered gi|238617605|gb|FJ973380.1| 45107 g3381 i0 85.417 28.9210526315789 144 13 92 5 1 140 1656 1795 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 4396 143 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
20767433 20767433 PRJNA193544_S_NODE_3237_length_155_cov_5.103175_g3222_i0 PRJNA193544 3237 155 5.103175 7.90992125 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 268 1.16e-67   NTclustered gi|88792583|gb|DQ386164.1| 372086 g3222 i0 98.052 100.625806451613 154 3 99 0 2 155 1533 1380 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 15597 268 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
23317975 23317975 PRJNA193544_S_NODE_1239_length_229_cov_3093.275000_g1224_i0 PRJNA193544 1239 229 3093.275 7083.59975 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 303 5.11e-78   NTclustered gi|88792583|gb|DQ386164.1| 372086 g1224 i0 97.207 19.4454148471616 179 5 78 0 51 229 2216 2038 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 4453 303 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;