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contig_metadata

8 rows where bioproject = "PRJNA193544", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA193544 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1640647 1640647 PRJNA193544_S_NODE_1382_length_220_cov_4.115183_g1367_i0 PRJNA193544 1382 220 4.115183 9.0534026 Proceraea cornuta 122240 Annelida Annelida 97.1 8.87e-16   NTclustered gi|11494214|gb|AF212165.1|AF212165 122240 g1367 i0 87.805 12.7136363636364 82 10 37 0 2 83 3482 3563 Proceraea cornuta internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2797 97.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Syllidae Proceraea Proceraea cornuta
4192998 4192998 PRJNA193544_S_NODE_444_length_327_cov_11810.281879_g429_i0 PRJNA193544 444 327 11810.281879 38619.62174433 Chloeia sp. r EEE-2022 2907852 Annelida Annelida 276 1.6799999999999998e-69   NTclustered gi|2172937611|gb|OM135245.1| 2907852 g429 i0 83.612 146.122324159021 299 43 90 6 1 294 6707 7004 Chloeia sp. r EEE-2022 voucher UCNSCB-6857 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 47782 276 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Eunicida Amphinomidae Chloeia Chloeia sp. r EEE-2022
8019289 8019289 PRJNA193544_S_NODE_727_length_282_cov_14702.063241_g712_i0 PRJNA193544 727 282 14702.063241 41459.81833962 Lumbriculus variegatus 61662 Annelida Annelida 346 1.07e-90   NTclustered gi|17999856|gb|AY040693.1| 61662 g712 i0 91.7 88.9255319148936 253 16 88 5 1 249 2 253 Lumbriculus variegatus 18S ribosomal RNA gene, partial sequence blastn 25077 346 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus variegatus
9983262 9983262 PRJNA193544_S_NODE_1028_length_248_cov_637.652968_g1013_i0 PRJNA193544 1028 248 637.652968 1581.37936064 Aeolosoma 55816 Annelida Annelida 342 1.1899999999999999e-89   NTclustered gi|111559284|gb|DQ790019.1| 397537 g1013 i0 94.954 76.9758064516129 218 11 88 0 29 246 262 45 Aeolosoma sp. THS-2006 28S large subunit ribosomal RNA gene, partial sequence blastn 19090 342 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Aeolosomatidae Aeolosoma Aeolosoma sp. THS-2006
16943135 16943135 PRJNA193544_S_NODE_1274_length_226_cov_21.675127_g1259_i0 PRJNA193544 1274 226 21.675127 48.98578702 Aeolosoma sp. THS-2006 397537 Annelida Annelida 324 3.86e-84   NTclustered gi|111559284|gb|DQ790019.1| 397537 g1259 i0 92.511 101.29203539823 227 15 100 2 1 226 2870 2645 Aeolosoma sp. THS-2006 28S large subunit ribosomal RNA gene, partial sequence blastn 22892 324 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Aeolosomatidae Aeolosoma Aeolosoma sp. THS-2006
17632885 17632885 PRJNA193544_S_NODE_814_length_271_cov_28.644628_g799_i0 PRJNA193544 814 271 28.644628 77.62694188 Naididae 2109251 Annelida Annelida 492 1.24e-134   NTclustered gi|94467835|gb|DQ459983.1| 74736 g799 i0 99.628 99.8154981549816 269 1 99 0 3 271 1 269 Nais elinguis 18S ribosomal RNA gene, partial sequence blastn 27050 496 0.991935483870968 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Nais Nais elinguis
18217575 18217575 PRJNA193544_S_NODE_1775_length_200_cov_23456.812865_g1760_i0 PRJNA193544 1775 200 23456.812865 46913.62573 Helobdella robusta 6412 Annelida Annelida 248 2.06e-61   NTclustered gi|675861809|ref|XM_009018217.1| 6412 g1760 i0 93.413 75.6 167 11 84 0 1 167 311 477 Helobdella robusta hypothetical protein mRNA blastn 15120 248 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
22732020 22732020 PRJNA193544_S_NODE_698_length_286_cov_34.762646_g683_i0 PRJNA193544 698 286 34.762646 99.42116756 Lumbriculidae 77569 Annelida Annelida 412 1.0499999999999999e-110   NTclustered gi|9437495|gb|AF209457.1|AF209457 61662 g683 i0 92.982 100.34965034965 285 16 99 4 5 286 298 15 Lumbriculus variegatus 18S ribosomal RNA gene, partial sequence blastn 28700 412 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;