RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA193544", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA193544 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11844427 11844427 PRJNA193544_S_NODE_1170_length_236_cov_245.420290_g1155_i0 PRJNA193544 1170 236 245.42029 579.1918844 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 130 9.51e-26   NTclustered gi|2518551211|emb|OX638338.1| 2447898 g1155 i0 86.957 26.8771186440678 115 15 49 0 71 185 2780998 2781112 MAG: Candidatus Kapabacteria bacterium isolate 9634bca7-0036-4470-acfa-8c32e30c46ef genome assembly, chromosome: 1 blastn 6343 130 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
16943173 16943173 PRJNA193544_S_NODE_3154_length_157_cov_3.250000_g3139_i0 PRJNA193544 3154 157 3.25 5.1025 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 87.9 3.55e-13   NTclustered gi|2621704217|emb|OY761611.1| 2447898 g3139 i0 85.882 3.45859872611465 85 9 53 3 42 124 1418565 1418648 MAG: Candidatus Kapabacteria bacterium isolate 963550f5-4d88-4eb0-99f7-25ebda648600 genome assembly, chromosome: 1 blastn 543 87.9 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;