RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA188516", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA188516 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28589979 28589979 PRJNA188516_P_NODE_4107_length_169_cov_0.866667_g4057_i0 PRJNA188516 4107 169 0.866667 1.46466723 Dysidea avara 196820 Porifera other_Eukaryota 58.9 8.07e-9   NR XP_065906893.1 196820 g4057 i0 48.1 0.958579881656805 54 28 95.9 0 6 167 95 148 XP_065906893.1 cystatin-B-like [Dysidea avara] diamond 162 58.9 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
31210885 31210885 PRJNA188516_P_NODE_4755_length_167_cov_0.881356_g4705_i0 PRJNA188516 4755 167 0.881356 1.47186452 Sycon ciliatum 27933 Porifera other_Eukaryota 41.2 0.0475   NR XP_065185667.1 27933 g4705 i0 34.5 0.988023952095808 55 36 98.8 0 166 2 215 269 XP_065185667.1 leishmanolysin-like peptidase [Sycon ciliatum] diamond 165 41.2 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;