RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA188516", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA188516 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365748 365748 PRJNA188516_P_NODE_1221_length_336_cov_1.177700_g1171_i0 PRJNA188516 1221 336 1.1777 3.957072 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 136 4.7200000000000004e-36   NR XP_004830458.1 1537102 g1171 i0 57.3 2.02678571428571 110 46 98.2 1 1 330 100 208 XP_004830458.1 60S ribosomal protein L3, putative [Theileria equi strain WA] diamond 681 136 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
2330469 2330469 PRJNA188516_P_NODE_3102_length_194_cov_1.068966_g3052_i0 PRJNA188516 3102 194 1.068966 2.07379404 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 86.1 1.65e-12   NTclustered gi|833484291|ref|XM_012911757.1| 5866 g3052 i0 96.154 11.8350515463918 52 2 27 0 120 171 279 228 Babesia bigemina 60S ribosomal L22e protein, putative partial mRNA blastn 2296 86.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
5469125 5469125 PRJNA188516_P_NODE_2905_length_201_cov_1.026316_g2855_i0 PRJNA188516 2905 201 1.026316 2.06289516 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 196 7.63e-46   NTclustered gi|2560612139|gb|OR419798.1| 5807 g2855 i0 88.344 18.8606965174129 163 19 81 0 1 163 6161 5999 Cryptosporidium parvum small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3791 196 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
15082744 15082744 PRJNA188516_P_NODE_5592_length_163_cov_1.815789_g5542_i0 PRJNA188516 5592 163 1.815789 2.95973607 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 89 7.390000000000001e-21   NR GFE53273.1 5869 g5542 i0 79.2 3.90184049079755 53 11 97.5 0 161 3 1 53 GFE53273.1 60S ribosomal protein L27a-3-like [Babesia ovis] diamond 636 89 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
27642812 27642812 PRJNA188516_P_NODE_6224_length_155_cov_2.452830_g6174_i0 PRJNA188516 6224 155 2.45283 3.8018865 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 45.4 6.81e-4   NR XP_003884203.1 572307 g6174 i0 53.3 2.70967741935484 45 19 87.1 1 136 2 5 47 XP_003884203.1 hypothetical protein NCLIV_046040 [Neospora caninum Liverpool] diamond 420 45.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27926777 27926777 PRJNA188516_P_NODE_4385_length_168_cov_0.873950_g4335_i0 PRJNA188516 4385 168 0.87395 1.468236 Babesia divergens 32595 SAR_Eukaryotes SAR_Eukaryotes 87.8 1.28e-18   NR KAK1936107.1 32595 g4335 i0 76.4 3.92857142857143 55 13 98.2 0 167 3 25 79 KAK1936107.1 putative DnaJ chaperone [Babesia divergens] diamond 660 87.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia divergens
30249949 30249949 PRJNA188516_P_NODE_1812_length_260_cov_2.848341_g1762_i0 PRJNA188516 1812 260 2.848341 7.4056866 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 89.4 4.96e-20   NR CAD2102082.1 119398 g1762 i0 47.7 6.93461538461538 86 45 99.2 0 2 259 15 100 CAD2102082.1 60S ribosomal protein L18, putative [Plasmodium vinckei brucechwatti] diamond 1803 89.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
30579228 30579228 PRJNA188516_P_NODE_5293_length_165_cov_0.896552_g5243_i0 PRJNA188516 5293 165 0.896552 1.4793108 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 68.2 1.24e-13   NR XP_028527213.1 5849 g5243 i0 65.4 1.87272727272727 52 18 94.5 0 164 9 6 57 XP_028527213.1 40S ribosomal protein S30, putative [Plasmodium gallinaceum] diamond 309 68.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
31401359 31401359 PRJNA188516_P_NODE_3216_length_190_cov_1.106383_g3166_i0 PRJNA188516 3216 190 1.106383 2.1021277 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 90.1 2.02e-20   NR OEH76901.1 88456 g3166 i0 72.1 2.81052631578947 61 17 96.3 0 187 5 91 151 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 534 90.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;