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contig_metadata

12 rows where bioproject = "PRJNA188516", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 12 ✖

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA188516 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365828 365828 PRJNA188516_P_NODE_5921_length_162_cov_1.265487_g5871_i0 PRJNA188516 5921 162 1.265487 2.05008894 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 156 9.99e-34   NTclustered gi|2119415480|ref|XM_044697106.1| 51637 g5871 i0 95.833 0.592592592592593 96 4 59 0 67 162 884 789 Naegleria lovaniensis uncharacterized protein (C9374_007165), partial mRNA blastn 96 156 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
1640590 1640590 PRJNA188516_P_NODE_4302_length_168_cov_0.873950_g4252_i0 PRJNA188516 4302 168 0.87395 1.468236 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 294 2.12e-75   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4252 i0 98.214 3.23214285714286 168 3 100 0 1 168 3426 3259 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 543 294 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4192931 4192931 PRJNA188516_P_NODE_5204_length_165_cov_0.896552_g5154_i0 PRJNA188516 5204 165 0.896552 1.4793108 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 224 2.76e-54   NTclustered gi|290995249|ref|XM_002680162.1| 5762 g5154 i0 91.515 1 165 11 100 2 1 165 795 634 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_78802), partial mRNA blastn 165 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5469183 5469183 PRJNA188516_P_NODE_6065_length_162_cov_0.920354_g6015_i0 PRJNA188516 6065 162 0.920354 1.49097348 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 272 9.51e-69   NTclustered gi|4321711|gb|AF058284.1|AF058284 5764 g6015 i0 96.914 41.6049382716049 162 5 100 0 1 162 444 283 Naegleria andersoni elongation factor 1 alpha (tef2) gene, partial cds blastn 6740 272 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
7433081 7433081 PRJNA188516_P_NODE_4226_length_169_cov_0.866667_g4176_i0 PRJNA188516 4226 169 0.866667 1.46466723 Naegleria 5761 Heterolobosea other_Eukaryota 300 4.56e-77   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4176 i0 98.81 29.1538461538462 168 2 99 0 2 169 3803 3636 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 4927 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14394877 14394877 PRJNA188516_P_NODE_2892_length_201_cov_1.368421_g2842_i0 PRJNA188516 2892 201 1.368421 2.75052621 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 355 1.19e-93   NTclustered gi|4321709|gb|AF058283.1|AF058283 5764 g2842 i0 98.507 78.2487562189055 201 3 100 0 1 201 829 1029 Naegleria andersoni elongation factor 1 alpha (tef1) gene, partial cds blastn 15728 355 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
16943045 16943045 PRJNA188516_P_NODE_2394_length_222_cov_1.202312_g2344_i0 PRJNA188516 2394 222 1.202312 2.66913264 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 315 2.27e-81   NTclustered gi|290989207|ref|XM_002677187.1| 5762 g2344 i0 92.342 4.94594594594595 222 15 99 2 2 222 183 403 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56165), mRNA blastn 1098 315 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23317911 23317911 PRJNA188516_P_NODE_3479_length_182_cov_1.172932_g3429_i0 PRJNA188516 3479 182 1.172932 2.13473624 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 220 4.01e-53   NTclustered gi|290993924|ref|XM_002679537.1| 5762 g3429 i0 88.462 1 182 21 100 0 1 182 339 158 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_38480), mRNA blastn 182 220 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24592071 24592071 PRJNA188516_P_NODE_4240_length_169_cov_0.866667_g4190_i0 PRJNA188516 4240 169 0.866667 1.46466723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 178 2.23e-40   NTclustered gi|290984136|ref|XM_002674738.1| 5762 g4190 i0 88 1.93491124260355 150 18 89 0 3 152 1900 2049 Naegleria gruberi succinate dehydrogenase (NAEGRDRAFT_83231), mRNA blastn 327 178 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24592082 24592082 PRJNA188516_P_NODE_5160_length_165_cov_0.896552_g5110_i0 PRJNA188516 5160 165 0.896552 1.4793108 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 204 3.5999999999999995e-48   NTclustered gi|290999169|ref|XM_002682107.1| 5762 g5110 i0 90.323 1.61212121212121 155 15 94 0 3 157 154 308 Naegleria gruberi 40S ribosomal protein S16 (NAEGRDRAFT_35163), partial mRNA blastn 266 204 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29000665 29000665 PRJNA188516_P_NODE_5508_length_164_cov_0.904348_g5458_i0 PRJNA188516 5508 164 0.904348 1.48313072 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 101 1.24e-26   NR XP_044569069.1 5763 g5458 i0 90.7 0.98780487804878 54 5 98.8 0 2 163 5 58 XP_044569069.1 uncharacterized protein FDP41_007533 [Naegleria fowleri] diamond 162 101 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31147771 31147771 PRJNA188516_P_NODE_4195_length_169_cov_0.866667_g4145_i0 PRJNA188516 4195 169 0.866667 1.46466723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 110 1.68e-26   NR XP_002679243.1 5762 g4145 i0 91.1 0.994082840236686 56 5 99.4 0 2 169 438 493 XP_002679243.1 uncharacterized protein NAEGRDRAFT_350, partial [Naegleria gruberi] diamond 168 110 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;