RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA188516", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 11 ✖

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJNA188516 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5469136 5469136 PRJNA188516_P_NODE_3305_length_187_cov_1.311594_g3255_i0 PRJNA188516 3305 187 1.311594 2.45268078 Stemonaria longa 1258717 Evosea other_Eukaryota 152 1.5299999999999998e-32   NTclustered gi|2714663874|gb|OR759949.1| 1258717 g3255 i0 89.256 68.0106951871658 121 13 65 0 67 187 589 469 Stemonaria longa translation elongation factor EF-1 subunit alpha (EF1A) gene, partial cds blastn 12718 152 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonaria Stemonaria longa
10569906 10569906 PRJNA188516_P_NODE_5389_length_164_cov_0.904348_g5339_i0 PRJNA188516 5389 164 0.904348 1.48313072 Arcyria cinerea 137621 Evosea other_Eukaryota 198 1.66e-46   NTclustered gi|2772191589|gb|PQ014972.1| 137621 g5339 i0 91.608 68 143 12 87 0 15 157 126 268 Arcyria cinerea voucher sc32852 translation elongation factor 1-alpha (EF1a) gene, partial cds blastn 11152 198 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria cinerea
14394861 14394861 PRJNA188516_P_NODE_2032_length_243_cov_1.072165_g1982_i0 PRJNA188516 2032 243 1.072165 2.60536095 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 90.1 9.61e-22   NR PRP81011.1 1890364 g1982 i0 77.4 3.12345679012346 62 13 76.5 1 26 211 9 69 PRP81011.1 40S ribosomal protein S28 [Planoprotostelium fungivorum] diamond 759 90.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
15668576 15668576 PRJNA188516_P_NODE_2373_length_223_cov_1.086207_g2323_i0 PRJNA188516 2373 223 1.086207 2.42224161 Acytostelium subglobosum 361139 Evosea other_Eukaryota 99 2.51e-16   NTclustered gi|831770523|ref|XM_012897573.1| 1410327 g2323 i0 88.889 1.00896860986547 81 7 36 2 43 122 431 352 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 225 99 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
22042467 22042467 PRJNA188516_P_NODE_5798_length_163_cov_0.912281_g5748_i0 PRJNA188516 5798 163 0.912281 1.48701803 Acytostelium subglobosum 361139 Evosea other_Eukaryota 147 6.0599999999999996e-31   NTclustered gi|831760979|ref|XM_012894664.1| 1410327 g5748 i0 84.106 37.8036809815951 151 24 93 0 1 151 195 345 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 6162 147 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
26662125 26662125 PRJNA188516_P_NODE_6061_length_162_cov_0.920354_g6011_i0 PRJNA188516 6061 162 0.920354 1.49097348 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 79 2.18e-15   NR KAH3764675.1 1580589 g6011 i0 57.1 1.03703703703704 56 21 98.1 1 159 1 660 715 KAH3764675.1 e3 ubiquitin-protein ligase [Pelomyxa schiedti] diamond 168 79 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28860098 28860098 PRJNA188516_P_NODE_5828_length_163_cov_0.912281_g5778_i0 PRJNA188516 5828 163 0.912281 1.48701803 Eumycetozoa 142796 Evosea other_Eukaryota 60.5 6.77e-9   NR KAF2073298.1 133409 g5778 i0 51.9 1.87730061349693 52 25 95.7 0 161 6 491 542 KAF2073298.1 hypothetical protein CYY_005397 [Polysphondylium violaceum] diamond 306 60.8 0.995065789473684 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29095138 29095138 PRJNA188516_P_NODE_5568_length_164_cov_0.886957_g5518_i0 PRJNA188516 5568 164 0.886957 1.45460948 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 68.9 7.32e-12   NR PRP80802.1 1890364 g5518 i0 60.8 1.86585365853659 51 20 93.3 0 160 8 263 313 PRP80802.1 clathrin heavy chain, partial [Planoprotostelium fungivorum] diamond 306 68.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30295520 30295520 PRJNA188516_P_NODE_2992_length_197_cov_2.527027_g2942_i0 PRJNA188516 2992 197 2.527027 4.97824319 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 76.6 1.96e-14   NR PRP77394.1 1890364 g2942 i0 44.6 0.989847715736041 65 36 99 0 196 2 300 364 PRP77394.1 hypothetical protein PROFUN_14400 [Planoprotostelium fungivorum] diamond 195 76.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32019999 32019999 PRJNA188516_P_NODE_5358_length_164_cov_0.904348_g5308_i0 PRJNA188516 5358 164 0.904348 1.48313072 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.2 6.5e-11   NR XP_020428166.1 670386 g5308 i0 55.6 8.76219512195122 54 24 98.8 0 163 2 458 511 XP_020428166.1 pleckstrin domain-containing protein [Heterostelium album PN500] diamond 1437 66.6 0.993993993993994 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
32381920 32381920 PRJNA188516_P_NODE_4739_length_167_cov_0.881356_g4689_i0 PRJNA188516 4739 167 0.881356 1.47186452 Polysphondylium violaceum 133409 Evosea other_Eukaryota 54.7 8.11e-7   NR KAF2078218.1 133409 g4689 i0 54.2 1.72455089820359 48 21 84.4 1 25 165 1172 1219 KAF2078218.1 hypothetical protein CYY_000508 [Polysphondylium violaceum] diamond 288 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;