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contig_metadata

21 rows where bioproject = "PRJNA177642" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA177642 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365436 365436 PRJNA177642_P_NODE_15641_length_183_cov_2.012987_g14416_i0 PRJNA177642 15641 183 2.012987 3.68376621 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 267 5.109999999999999e-67   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14416 i0 92.896 3 183 13 100 0 1 183 445 627 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 549 267 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6157847 6157847 PRJNA177642_P_NODE_14225_length_218_cov_1.634921_g13000_i0 PRJNA177642 14225 218 1.634921 3.56412778 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 278 2.92e-70   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g13000 i0 98.113 3.64220183486239 159 3 73 0 1 159 2924 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 794 278 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8707891 8707891 PRJNA177642_P_NODE_5527_length_604_cov_3.186087_g4450_i0 PRJNA177642 5527 604 3.186087 19.24396548 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 575 2.869999999999999e-159   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g4450 i0 97.067 54.8791390728477 341 10 98 0 264 604 2345 2005 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 33147 580 0.991379310344828 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11843985 11843985 PRJNA177642_P_NODE_13410_length_253_cov_1.250000_g12185_i0 PRJNA177642 13410 253 1.25 3.1625 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 88.2 4.35e-18   NR OMJ89868.1 5963 g12185 i0 49.4 16.4110671936759 83 42 98.4 0 249 1 577 659 OMJ89868.1 hypothetical protein SteCoe_7852 [Stentor coeruleus] diamond 4152 89 0.991011235955056 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
11844021 11844021 PRJNA177642_P_NODE_15410_length_188_cov_1.169811_g14185_i0 PRJNA177642 15410 188 1.169811 2.19924468 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 292 8.72e-75   NTclustered gi|347439295|gb|JN111996.1| 151077 g14185 i0 94.681 96.8351063829787 188 10 100 0 1 188 556 369 Chilodonella uncinata strain USA_SC2 alpha-tubulin (atub) gene, partial cds; macronuclear blastn 18205 292 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15668434 15668434 PRJNA177642_P_NODE_5193_length_629_cov_3.531667_g4136_i0 PRJNA177642 5193 629 3.531667 22.21418543 root 1 Root_unresolved Root_unresolved 163 3.2199999999999996e-45   NR OMJ94284.1 5963 g4136 i0 54 16.2352941176471 163 72 76.8 2 628 146 147 308 OMJ94284.1 hypothetical protein SteCoe_2628 [Stentor coeruleus] diamond 10212 164 0.99390243902439 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
16357511 16357511 PRJNA177642_P_NODE_13253_length_264_cov_4.123404_g12028_i0 PRJNA177642 13253 264 4.123404 10.88578656 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 477 3.359999999999999e-130   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g12028 i0 99.242 14.1931818181818 264 2 100 0 1 264 1775 1512 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 3747 477 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18906585 18906585 PRJNA177642_P_NODE_18595_length_162_cov_1.082707_g17370_i0 PRJNA177642 18595 162 1.082707 1.75398534 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 300 4.36e-77   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g17370 i0 100 26.962962962963 162 0 100 0 1 162 1209 1370 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 4368 300 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22042309 22042309 PRJNA177642_P_NODE_7558_length_459_cov_1.527907_g6371_i0 PRJNA177642 7558 459 1.527907 7.01309313 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 276 2.4299999999999997e-69   NTclustered gi|158347525|gb|EU047814.1| 151077 g6371 i0 93.085 36.7712418300654 188 13 41 0 271 458 97 284 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 16878 276 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24007062 24007062 PRJNA177642_P_NODE_10999_length_334_cov_2.219672_g9774_i0 PRJNA177642 10999 334 2.219672 7.41370448 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 213 1.36e-50   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g9774 i0 99.16 55.7904191616766 119 0 68 1 1 118 1656 1538 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 18634 213 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
26662118 26662118 PRJNA177642_P_NODE_3761_length_780_cov_6.478029_g2850_i0 PRJNA177642 3761 780 6.478029 50.5286262 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 59.3 6.16e-7   NR CDW86772.1 5949 g2850 i0 37.6 0.480769230769231 125 68 45.4 5 60 413 18 139 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 375 59.3 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27028489 27028489 PRJNA177642_P_NODE_13802_length_234_cov_1.160976_g12577_i0 PRJNA177642 13802 234 1.160976 2.71668384 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 87 3.07e-18   NR XP_001435272.1 5888 g12577 i0 53.8 4.03846153846154 78 35 98.7 1 1 231 189 266 XP_001435272.1 uncharacterized protein GSPATT00036656001 [Paramecium tetraurelia] diamond 945 87.4 0.995423340961098 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
27597401 27597401 PRJNA177642_P_NODE_15764_length_181_cov_1.763158_g14539_i0 PRJNA177642 15764 181 1.763158 3.19131598 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 83.2 2.16e-17   NR KRW98416.1 266149 g14539 i0 69 6.7292817679558 58 18 96.1 0 179 6 97 154 KRW98416.1 Ribosomal protein S5 domain 2-type fold [Pseudocohnilembus persalinus] diamond 1218 84 0.990476190476191 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
28021645 28021645 PRJNA177642_P_NODE_5265_length_623_cov_2.183502_g4206_i0 PRJNA177642 5265 623 2.183502 13.60321746 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 175 8.5e-52   NR CDW89587.1 5949 g4206 i0 57.4 0.746388443017656 155 47 66 2 3 413 34 187 CDW89587.1 UNKNOWN [Stylonychia lemnae] diamond 465 175 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28386547 28386547 PRJNA177642_P_NODE_14686_length_204_cov_1.645714_g13461_i0 PRJNA177642 14686 204 1.645714 3.35725656 root 1 Root_unresolved Root_unresolved 103 5.9899999999999996e-24   NR XP_001437608.1 5888 g13461 i0 76.1 13.7647058823529 67 16 98.5 0 3 203 410 476 XP_001437608.1 uncharacterized protein GSPATT00038313001 [Paramecium tetraurelia] diamond 2808 104 0.990384615384615 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
29459808 29459808 PRJNA177642_P_NODE_14970_length_198_cov_1.313609_g13745_i0 PRJNA177642 14970 198 1.313609 2.60094582 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 84.7 5.49e-19   NR CAD8050189.1 65129 g13745 i0 61 3.5 59 23 89.4 0 197 21 88 146 CAD8050189.1 unnamed protein product [Paramecium sonneborni] diamond 693 84.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
30200092 30200092 PRJNA177642_P_NODE_17172_length_168_cov_1.035971_g15947_i0 PRJNA177642 17172 168 1.035971 1.74043128 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 59.3 9.01e-9   NR CAD8208970.1 43137 g15947 i0 52 3.57142857142857 50 24 89.3 0 18 167 37 86 CAD8208970.1 unnamed protein product [Paramecium octaurelia] diamond 600 59.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
30642490 30642490 PRJNA177642_P_NODE_13533_length_246_cov_1.658986_g12308_i0 PRJNA177642 13533 246 1.658986 4.08110556 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 97.4 1.3899999999999998e-23   NR CDW86772.1 5949 g12308 i0 64 0.914634146341463 75 26 90.2 1 3 224 67 141 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 225 97.4 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31021837 31021837 PRJNA177642_P_NODE_14975_length_198_cov_1.278107_g13750_i0 PRJNA177642 14975 198 1.278107 2.53065186 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.00782   NR KRX07275.1 266149 g13750 i0 37.7 1.04545454545455 69 35 92.4 2 197 15 76 144 KRX07275.1 hypothetical protein PPERSA_06890 [Pseudocohnilembus persalinus] diamond 207 43.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32223737 32223737 PRJNA177642_P_NODE_17198_length_168_cov_1.035971_g15973_i0 PRJNA177642 17198 168 1.035971 1.74043128 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 57 1.15e-7   NR XP_001027342.1 312017 g15973 i0 51.9 1.83928571428571 52 24 92.9 1 164 9 217 267 XP_001027342.1 papain family cysteine protease [Tetrahymena thermophila SB210] diamond 309 57 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32255669 32255669 PRJNA177642_P_NODE_15538_length_185_cov_1.807692_g14313_i0 PRJNA177642 15538 185 1.807692 3.3442302 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 83.6 1.36e-18   NR AGE89250.1 153251 g14313 i0 71.9 3.85945945945946 57 16 92.4 0 171 1 89 145 AGE89250.1 60S ribosomal protein L27A [Cryptocaryon irritans] diamond 714 83.6 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;