contig_metadata
7 rows where bioproject = "PRJNA177642" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1640404 | 1640404 | PRJNA177642_P_NODE_5962_length_572_cov_3.151013_g4854_i0 | PRJNA177642 | 5962 | 572 | 3.151013 | 18.02379436 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 621 | 3.4299999999999994e-173 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g4854 | i0 | 86.538 | 7.26748251748252 | 572 | 68 | 100 | 3 | 1 | 572 | 3216479 | 3215917 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 4157 | 621 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 8018757 | 8018757 | PRJNA177642_P_NODE_11507_length_324_cov_1.294915_g10282_i0 | PRJNA177642 | 11507 | 324 | 1.294915 | 4.1955246 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 78.7 | 5.02e-10 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g10282 | i0 | 87.143 | 0.70679012345679 | 70 | 7 | 21 | 2 | 4 | 72 | 614763 | 614831 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 229 | 78.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 13119280 | 13119280 | PRJNA177642_P_NODE_17411_length_167_cov_1.028986_g16186_i0 | PRJNA177642 | 17411 | 167 | 1.028986 | 1.71840662 | Bacteria | 2 | Bacteria | Bacteria | 100 | 9.6e-24 | NR | MDE2506368.1 | 2026780 | g16186 | i0 | 87.3 | 3.93413173652695 | 55 | 7 | 98.8 | 0 | 1 | 165 | 74 | 128 | MDE2506368.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Planctomycetota bacterium] | diamond | 657 | 100 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 22042107 | 22042107 | PRJNA177642_P_NODE_17018_length_169_cov_1.007143_g15793_i0 | PRJNA177642 | 17018 | 169 | 1.007143 | 1.70207167 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 255 | 1e-63 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g15793 | i0 | 94.048 | 0.994082840236686 | 168 | 10 | 99 | 0 | 2 | 169 | 1332086 | 1331919 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 168 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 26852685 | 26852685 | PRJNA177642_P_NODE_15821_length_180_cov_1.688742_g14596_i0 | PRJNA177642 | 15821 | 180 | 1.688742 | 3.0397356 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 61.6 | 3.62e-9 | NR | HEY3322403.1 | 2026780 | g14596 | i0 | 62.3 | 3.38333333333333 | 61 | 16 | 90 | 1 | 162 | 1 | 670 | 730 | HEY3322403.1 Ig-like domain repeat protein [Planctomycetota bacterium] | diamond | 609 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28007879 | 28007879 | PRJNA177642_P_NODE_18865_length_157_cov_3.117188_g17640_i0 | PRJNA177642 | 18865 | 157 | 3.117188 | 4.89398516 | Planctomycetota | 203682 | Bacteria | Bacteria | 69.3 | 4.67e-12 | NR | MBN2560503.1 | 2026778 | g17640 | i0 | 58.8 | 9.74522292993631 | 51 | 21 | 97.5 | 0 | 3 | 155 | 265 | 315 | MBN2560503.1 protein kinase [Phycisphaerae bacterium] | diamond | 1530 | 69.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 31577222 | 31577222 | PRJNA177642_P_NODE_10836_length_338_cov_0.987055_g9612_i0 | PRJNA177642 | 10836 | 338 | 0.987055 | 3.3362459 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 57.4 | 7.57e-7 | NR | MCH8270949.1 | 2026780 | g9612 | i0 | 100 | 0.532544378698225 | 30 | 0 | 26.6 | 0 | 241 | 330 | 268 | 297 | MCH8270949.1 asparaginase [Planctomycetota bacterium] | diamond | 180 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;