RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA177642" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA177642 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24592003 24592003 PRJNA177642_P_NODE_9660_length_367_cov_1.627219_g8440_i0 PRJNA177642 9660 367 1.627219 5.97189373 candidate division CPR1 bacterium ADurb.Bin16 1618338 Bacteria Bacteria 194 2.13e-58   NR OQB40762.1 1852826 g8440 i0 77 0.997275204359673 122 28 99.7 0 367 2 81 202 OQB40762.1 MAG: putative transposase [candidate division CPR1 bacterium ADurb.Bin160] diamond 366 194 1 Bacteria Bacteria candidate phyla   candidate division CPR1         candidate division CPR1 bacterium ADurb.Bin160
26884246 26884246 PRJNA177642_P_NODE_18621_length_162_cov_1.060150_g17396_i0 PRJNA177642 18621 162 1.06015 1.717443 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 75.1 1.55e-16   NR RPH73484.1 2053607 g17396 i0 87.2 1.44444444444444 39 4 72.2 1 124 8 1 38 RPH73484.1 MAG: DUF3891 family protein, partial [Candidatus Rokuibacteriota bacterium] diamond 234 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;