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contig_metadata

28 rows where bioproject = "PRJNA169559" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA169559 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
365115 365115 PRJNA169559_P_NODE_47321_length_180_cov_1.364238_g45244_i0 PRJNA169559 47321 180 1.364238 2.4556284 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 100 5.38e-17   NTclustered gi|470477574|ref|XM_004342324.1| 1257118 g45244 i0 82.051 0.65 117 21 65 0 4 120 142 26 Acanthamoeba castellanii str. Neff Gprotein-coupled receptor (GPCR) family protein (ACA1_012740), partial mRNA blastn 117 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1639823 1639823 PRJNA169559_P_NODE_31022_length_260_cov_2.549784_g28946_i0 PRJNA169559 31022 260 2.549784 6.6294384 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 60.2 1.42e-4   NTclustered gi|470394462|ref|XM_004334945.1| 1257118 g28946 i0 97.143 0.673076923076923 35 1 13 0 68 102 174 140 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_096510), partial mRNA blastn 175 60.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1639834 1639834 PRJNA169559_P_NODE_32442_length_255_cov_2.017699_g30366_i0 PRJNA169559 32442 255 2.017699 5.14513245 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 137 6.22e-28   NTclustered gi|470381496|ref|XM_004333736.1| 1257118 g30366 i0 81.395 17.2745098039216 172 28 67 4 86 255 1216 1385 Acanthamoeba castellanii str. Neff methylmalonatesemialdehyde dehydrogenase (acylating), putative (ACA1_362550), partial mRNA blastn 4405 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5468564 5468564 PRJNA169559_P_NODE_9725_length_544_cov_891.689320_g7994_i0 PRJNA169559 9725 544 891.68932 4850.7899008 Ripella decalvata 2047822 Discosea other_Eukaryota 752 0   NTclustered gi|1269228440|gb|MF683565.1| 2047822 g7994 i0 92.393 96.6213235294118 539 23 97 14 1 526 21 554 Ripella decalvata clone 15104 18S ribosomal RNA gene, partial sequence blastn 52562 752 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
6742780 6742780 PRJNA169559_P_NODE_43746_length_224_cov_1.589744_g41669_i0 PRJNA169559 43746 224 1.589744 3.56102656 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.44e-48   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g41669 i0 84.112 12.5178571428571 214 32 95 2 2 214 1128 916 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 2804 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8018395 8018395 PRJNA169559_P_NODE_34387_length_249_cov_1.936364_g32310_i0 PRJNA169559 34387 249 1.936364 4.82154636 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 165 2.77e-36   NTclustered gi|470421329|ref|XM_004337330.1| 1257118 g32310 i0 78.967 31.5983935742972 271 35 100 11 1 249 2033 1763 Acanthamoeba castellanii str. Neff Major Vault Protein repeatcontaining protein (ACA1_275390), partial mRNA blastn 7868 165 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9293063 9293063 PRJNA169559_P_NODE_2388_length_1068_cov_3.870067_g1508_i0 PRJNA169559 2388 1068 3.870067 41.33231556 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 678 0   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g1508 i0 80.649 66.811797752809 894 157 83 14 3 888 1347 462 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 71355 678 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10569254 10569254 PRJNA169559_P_NODE_6109_length_687_cov_3.173252_g4675_i0 PRJNA169559 6109 687 3.173252 21.80024124 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 257 1.08e-83   NR XP_004333640.1 1257118 g4675 i0 71.6 21.5109170305677 176 48 76 1 156 677 23 198 XP_004333640.1 peroxiredoxin 2, putative [Acanthamoeba castellanii str. Neff] diamond 14778 259 0.992277992277992 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12533445 12533445 PRJNA169559_P_NODE_34550_length_248_cov_150.894977_g32473_i0 PRJNA169559 34550 248 150.894977 374.21954296 Vannella 95228 Discosea other_Eukaryota 409 1.16e-109   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g32473 i0 96.371 92.7016129032258 248 9 100 0 1 248 138 385 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 22990 409 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
13808206 13808206 PRJNA169559_P_NODE_25831_length_293_cov_2.893939_g23755_i0 PRJNA169559 25831 293 2.893939 8.47924127 root 1 Root_unresolved Root_unresolved 145 4.36e-30   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g23755 i0 79.803 53.0477815699659 203 37 69 3 2 202 258 58 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 15543 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14394261 14394261 PRJNA169559_P_NODE_472_length_2691_cov_9.120586_g177_i0 PRJNA169559 472 2691 9.120586 245.43496926 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 1698 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g177 i0 79.238 87.7896692679301 2495 474 92 35 126 2601 2520 51 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 236242 1698 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15668037 15668037 PRJNA169559_P_NODE_6013_length_692_cov_8.829563_g4587_i0 PRJNA169559 6013 692 8.829563 61.10057596 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 401 5.949999999999999e-107   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g4587 i0 78.896 67.8294797687861 616 112 88 15 14 620 1 607 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46938 401 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15668063 15668063 PRJNA169559_P_NODE_8233_length_591_cov_831.177936_g6610_i0 PRJNA169559 8233 591 831.177936 4912.26160176 Ripella sp. 805 1217113 Discosea other_Eukaryota 881 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g6610 i0 95.035 95.8883248730965 564 22 95 6 12 573 1 560 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 56670 881 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
19490862 19490862 PRJNA169559_P_NODE_1816_length_1238_cov_3.152192_g1084_i0 PRJNA169559 1816 1238 3.152192 39.02413696 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.9 1.07e-10   NR XP_004356761.1 1257118 g1084 i0 49.2 0.152665589660743 63 30 15.3 1 1076 888 221 281 XP_004356761.1 PB1 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 189 75.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22041433 22041433 PRJNA169559_P_NODE_10198_length_530_cov_647.073852_g8444_i0 PRJNA169559 10198 530 647.073852 3429.4914156 Ripella sp. 805 1217113 Discosea other_Eukaryota 761 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g8444 i0 92.683 99.522641509434 533 31 99 6 2 530 1671 1143 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 52747 761 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
22041495 22041495 PRJNA169559_P_NODE_17258_length_409_cov_1.847368_g15270_i0 PRJNA169559 17258 409 1.847368 7.55573512 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 168 1.34e-48   NR XP_004356622.1 1257118 g15270 i0 61.8 0.997555012224939 136 45 99.8 1 408 1 130 258 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 408 168 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22041839 22041839 PRJNA169559_P_NODE_9858_length_540_cov_6.500978_g8122_i0 PRJNA169559 9858 540 6.500978 35.1052812 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.37e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g8122 i0 80.795 55.2944444444444 302 58 56 0 99 400 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 29859 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26662101 26662101 PRJNA169559_P_NODE_11201_length_503_cov_1.955696_g9380_i0 PRJNA169559 11201 503 1.955696 9.83715088 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.1 6.73e-4   NR XP_004351526.1 1257118 g9380 i0 46.9 0.292246520874752 49 26 29.2 0 450 304 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 48.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28495242 28495242 PRJNA169559_P_NODE_12067_length_485_cov_2.697368_g10212_i0 PRJNA169559 12067 485 2.697368 13.0822348 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 97.1 2.8e-20   NR XP_004335438.1 1257118 g10212 i0 36.1 0.822680412371134 133 69 72.4 4 134 484 185 317 XP_004335438.1 oxysterol binding protein [Acanthamoeba castellanii str. Neff] diamond 399 97.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28544680 28544680 PRJNA169559_P_NODE_13567_length_455_cov_4.302817_g11660_i0 PRJNA169559 13567 455 4.302817 19.57781735 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.9 1.63e-14   NR ALV66539.1 5755 g11660 i0 41.1 4.71428571428571 107 63 70.5 0 398 78 334 440 ALV66539.1 arginine methyltransferase 5 [Acanthamoeba castellanii] diamond 2145 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28607616 28607616 PRJNA169559_P_NODE_7467_length_621_cov_3.293919_g5908_i0 PRJNA169559 7467 621 3.293919 20.45523699 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 254 1.59e-80   NR XP_004353078.1 1257118 g5908 i0 65.6 11.8840579710145 189 64 91.3 1 4 570 166 353 XP_004353078.1 meiotic recombinase Dmc1, putative [Acanthamoeba castellanii str. Neff] diamond 7380 256 0.9921875 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29189882 29189882 PRJNA169559_P_NODE_37409_length_241_cov_2.122642_g35332_i0 PRJNA169559 37409 241 2.122642 5.11556722 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.1 3.72e-7   NR XP_004334493.1 1257118 g35332 i0 43.1 1.26970954356846 51 24 59.8 2 211 68 21 69 XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] diamond 306 55.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29410621 29410621 PRJNA169559_P_NODE_1849_length_1223_cov_4.364322_g1109_i0 PRJNA169559 1849 1223 4.364322 53.37565806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 383 3.12e-127   NR XP_004341586.1 1257118 g1109 i0 54.2 0.968928863450532 395 180 96.6 1 23 1204 4 398 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 1185 383 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29680795 29680795 PRJNA169559_P_NODE_8950_length_568_cov_5.376623_g7273_i0 PRJNA169559 8950 568 5.376623 30.53921864 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 176 4.55e-53   NR XP_004333102.1 1257118 g7273 i0 64.9 5.54577464788732 134 46 70.8 1 33 434 1 133 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 3150 176 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30895573 30895573 PRJNA169559_P_NODE_17334_length_408_cov_3.361478_g15344_i0 PRJNA169559 17334 408 3.361478 13.71483024 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 135 1.31e-37   NR XP_004334493.1 1257118 g15344 i0 40.4 1 136 80 99.3 1 3 407 12 147 XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] diamond 408 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31387518 31387518 PRJNA169559_P_NODE_43956_length_223_cov_1.804124_g41879_i0 PRJNA169559 43956 223 1.804124 4.02319652 root 1 Root_unresolved Root_unresolved 67 6.74e-11   NR XP_004335307.1 1257118 g41879 i0 48 1.99103139013453 75 38 99.6 1 223 2 231 305 XP_004335307.1 sterol 24C-methyltransferase [Acanthamoeba castellanii str. Neff] diamond 444 67 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32287238 32287238 PRJNA169559_P_NODE_13439_length_457_cov_7.714953_g11533_i0 PRJNA169559 13439 457 7.714953 35.25733521 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 164 4.6e-49   NR 1PRQ_A 5755 g11533 i0 67.2 1.64113785557987 125 41 82.1 0 54 428 1 125 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] diamond 750 164 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32381909 32381909 PRJNA169559_P_NODE_44619_length_219_cov_2.284211_g42542_i0 PRJNA169559 44619 219 2.284211 5.00242209 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.5 7.25e-21   NR XP_004344089.1 1257118 g42542 i0 60 5.72602739726027 70 28 95.9 0 211 2 2202 2271 XP_004344089.1 PremRNA processing splicing factor 8, putative [Acanthamoeba castellanii str. Neff] diamond 1254 95.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;