contig_metadata
10 rows where bioproject = "PRJNA169559", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 364777 | 364777 | PRJNA169559_P_NODE_10001_length_536_cov_5.086785_g8261_i0 | PRJNA169559 | 10001 | 536 | 5.086785 | 27.2651676 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 806 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g8261 | i0 | 93.843 | 74.8731343283582 | 536 | 31 | 99 | 2 | 2 | 536 | 511963 | 512497 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 40132 | 806 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 10568892 | 10568892 | PRJNA169559_P_NODE_11529_length_496_cov_2.751606_g9695_i0 | PRJNA169559 | 11529 | 496 | 2.751606 | 13.64796576 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 577 | 6.459999999999999e-160 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g9695 | i0 | 87.867 | 91.5483870967742 | 511 | 34 | 100 | 3 | 1 | 496 | 3446808 | 3447305 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 45408 | 577 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 18906265 | 18906265 | PRJNA169559_P_NODE_22755_length_331_cov_7.258278_g20685_i0 | PRJNA169559 | 22755 | 331 | 7.258278 | 24.02490018 | Peredibacter | 263370 | Bacteria | Bacteria | 582 | 8.939999999999999e-162 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g20685 | i0 | 98.485 | 362.888217522659 | 330 | 5 | 99 | 0 | 1 | 330 | 511177 | 511506 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 120116 | 582 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 22041590 | 22041590 | PRJNA169559_P_NODE_24638_length_306_cov_28.061372_g22562_i0 | PRJNA169559 | 24638 | 306 | 28.061372 | 85.86779832 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 507 | 5.07e-139 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g22562 | i0 | 96.711 | 227.813725490196 | 304 | 10 | 99 | 0 | 3 | 306 | 511479 | 511782 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 69711 | 507 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 23317193 | 23317193 | PRJNA169559_P_NODE_42099_length_229_cov_128.770000_g40022_i0 | PRJNA169559 | 42099 | 229 | 128.77 | 294.8833 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 379 | 8.249999999999999e-101 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g40022 | i0 | 98.598 | 215.362445414847 | 214 | 3 | 93 | 0 | 1 | 214 | 1293347 | 1293560 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 49318 | 379 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 24006803 | 24006803 | PRJNA169559_P_NODE_47619_length_174_cov_2.482759_g45542_i0 | PRJNA169559 | 47619 | 174 | 2.482759 | 4.32000066 | Bacteriovorax | 146784 | Bacteria | Bacteria | 202 | 1.3699999999999998e-47 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g45542 | i0 | 87.113 | 12.1436781609195 | 194 | 5 | 100 | 7 | 1 | 174 | 1660562 | 1660369 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 2113 | 202 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 30073789 | 30073789 | PRJNA169559_P_NODE_48892_length_152_cov_1.195122_g46815_i0 | PRJNA169559 | 48892 | 152 | 1.195122 | 1.81658544 | Silvanigrellales bacterium | 2767476 | Bacteria | Bacteria | 73.2 | 1.69e-13 | NR | MCA2960788.1 | 2767476 | g46815 | i0 | 76 | 3.90789473684211 | 50 | 11 | 98.7 | 1 | 151 | 2 | 213 | 261 | MCA2960788.1 S-methyl-5-thioribose-1-phosphate isomerase [Silvanigrellales bacterium] | diamond | 594 | 73.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellales bacterium | ||||
| 30421843 | 30421843 | PRJNA169559_P_NODE_11153_length_504_cov_2.749474_g9334_i0 | PRJNA169559 | 11153 | 504 | 2.749474 | 13.85734896 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 90.5 | 1.74e-19 | NR | HVJ64814.1 | 3034175 | g9334 | i0 | 35.4 | 2.54166666666667 | 144 | 84 | 82.7 | 3 | 6 | 422 | 20 | 159 | HVJ64814.1 GyrI-like domain-containing protein [Bdellovibrionota bacterium] | diamond | 1281 | 90.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30800504 | 30800504 | PRJNA169559_P_NODE_36214_length_244_cov_2.083721_g34137_i0 | PRJNA169559 | 36214 | 244 | 2.083721 | 5.08427924 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 48.1 | 4.54e-4 | NR | MBY0414320.1 | 2053517 | g34137 | i0 | 47.8 | 1.13114754098361 | 46 | 22 | 56.6 | 1 | 10 | 147 | 264 | 307 | MBY0414320.1 NAD(P)-dependent alcohol dehydrogenase [Bdellovibrionales bacterium] | diamond | 276 | 48.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32854939 | 32854939 | PRJNA169559_P_NODE_44740_length_218_cov_2.333333_g42663_i0 | PRJNA169559 | 44740 | 218 | 2.333333 | 5.08666594 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 122 | 7.12e-31 | NR | MCB0368368.1 | 2053517 | g42663 | i0 | 86.1 | 0.990825688073395 | 72 | 8 | 99.1 | 1 | 2 | 217 | 305 | 374 | MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 216 | 122 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;