contig_metadata
10 rows where bioproject = "PRJNA169559", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29884540 | 29884540 | PRJNA169559_P_NODE_45851_length_203_cov_3.143678_g43774_i0 | PRJNA169559 | 45851 | 203 | 3.143678 | 6.38166634 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 130 | 7.5e-37 | NR | WP_282460195.1 | 2094 | g43774 | i0 | 100 | 0.990147783251232 | 67 | 0 | 99 | 0 | 2 | 202 | 51 | 117 | WP_282460195.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 201 | 130 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 30231894 | 30231894 | PRJNA169559_P_NODE_22272_length_339_cov_1.674194_g20207_i0 | PRJNA169559 | 22272 | 339 | 1.674194 | 5.67551766 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 137 | 3.72e-40 | NR | WP_282460194.1 | 2094 | g20207 | i0 | 100 | 0.566371681415929 | 64 | 0 | 56.6 | 0 | 268 | 77 | 1 | 64 | WP_282460194.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 192 | 137 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 31274580 | 31274580 | PRJNA169559_P_NODE_18415_length_396_cov_2.811989_g16409_i0 | PRJNA169559 | 18415 | 396 | 2.811989 | 11.13547644 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 211 | 9.16e-68 | NR | WP_282460074.1 | 2094 | g16409 | i0 | 100 | 0.772727272727273 | 102 | 0 | 77.3 | 0 | 387 | 82 | 49 | 150 | WP_282460074.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 306 | 211 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 31464640 | 31464640 | PRJNA169559_P_NODE_48336_length_160_cov_2.763359_g46259_i0 | PRJNA169559 | 48336 | 160 | 2.763359 | 4.4213744 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 105 | 3.6e-26 | NR | WP_282460166.1 | 2094 | g46259 | i0 | 92.3 | 0.975 | 52 | 4 | 97.5 | 0 | 3 | 158 | 89 | 140 | WP_282460166.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 156 | 105 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 31717417 | 31717417 | PRJNA169559_P_NODE_17557_length_406_cov_2.066313_g15564_i0 | PRJNA169559 | 17557 | 406 | 2.066313 | 8.38923078 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 200 | 2.96e-63 | NR | WP_282460065.1 | 2094 | g15564 | i0 | 100 | 0.731527093596059 | 99 | 0 | 73.2 | 0 | 299 | 3 | 1 | 99 | WP_282460065.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 297 | 200 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 31938731 | 31938731 | PRJNA169559_P_NODE_5577_length_719_cov_2.350725_g4188_i0 | PRJNA169559 | 5577 | 719 | 2.350725 | 16.90171275 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 328 | 4.1199999999999987e-112 | NR | WP_282460229.1 | 2094 | g4188 | i0 | 99.4 | 0.663421418636996 | 159 | 1 | 66.3 | 0 | 681 | 205 | 1 | 159 | WP_282460229.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 477 | 328 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 32476929 | 32476929 | PRJNA169559_P_NODE_18939_length_389_cov_2.469444_g16926_i0 | PRJNA169559 | 18939 | 389 | 2.469444 | 9.60613716 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 179 | 7.659999999999999e-56 | NR | MDI3349154.1 | 2094 | g16926 | i0 | 92.8 | 1.49614395886889 | 97 | 1 | 70.2 | 1 | 387 | 115 | 17 | 113 | MDI3349154.1 hypothetical protein [Mycoplasmopsis arginini] | diamond | 582 | 179 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 32476932 | 32476932 | PRJNA169559_P_NODE_22939_length_329_cov_2.453333_g20868_i0 | PRJNA169559 | 22939 | 329 | 2.453333 | 8.07146557 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 204 | 1.76e-65 | NR | WP_282460059.1 | 2094 | g20868 | i0 | 99 | 0.884498480243161 | 97 | 1 | 88.4 | 0 | 37 | 327 | 1 | 97 | WP_282460059.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 291 | 204 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 32540279 | 32540279 | PRJNA169559_P_NODE_37899_length_240_cov_1.587678_g35822_i0 | PRJNA169559 | 37899 | 240 | 1.587678 | 3.8104272 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 67.8 | 6.88e-12 | NR | WP_282460216.1 | 2094 | g35822 | i0 | 97.3 | 0.4625 | 37 | 1 | 46.3 | 0 | 239 | 129 | 136 | 172 | WP_282460216.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 111 | 67.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 32603158 | 32603158 | PRJNA169559_P_NODE_23360_length_323_cov_2.292517_g21287_i0 | PRJNA169559 | 23360 | 323 | 2.292517 | 7.40482991 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 201 | 7.05e-64 | NR | WP_282460215.1 | 2094 | g21287 | i0 | 96.3 | 0.993808049535604 | 107 | 4 | 99.4 | 0 | 3 | 323 | 46 | 152 | WP_282460215.1 hypothetical protein [Mycoplasmopsis arginini] | diamond | 321 | 201 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;