RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA169559", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA169559 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14394138 14394138 PRJNA169559_P_NODE_31132_length_260_cov_1.450216_g29056_i0 PRJNA169559 31132 260 1.450216 3.7705616 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 119 2.3000000000000003e-22   NTclustered gi|2076449834|gb|CP075365.1| 2682144 g29056 i0 95.89 10.8807692307692 73 3 60 0 1 73 1878784 1878856 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome blastn 2829 119 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
32666055 32666055 PRJNA169559_P_NODE_6660_length_658_cov_2.034976_g5175_i0 PRJNA169559 6660 658 2.034976 13.39014208 Armatimonadota bacterium 2033014 Bacteria Bacteria 116 5.539999999999999e-28   NR MBS1716519.1 2033014 g5175 i0 42 0.793313069908815 174 90 77.1 8 579 73 57 224 MBS1716519.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein [Armatimonadota bacterium] diamond 522 116 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;