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contig_metadata

19 rows where bioproject = "PRJNA169559", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 19 ✖

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA169559 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
364820 364820 PRJNA169559_P_NODE_13881_length_450_cov_7.273159_g11965_i0 PRJNA169559 13881 450 7.273159 32.7292155 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 230 1.8799999999999996e-55   NTclustered gi|813133999|ref|XM_012342618.1| 695850 g11965 i0 82.222 7.79777777777778 270 44 60 4 73 340 72 339 Saprolegnia parasitica CBS 223.65 ribonucleoprotein-associated protein mRNA blastn 3509 230 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
7432711 7432711 PRJNA169559_P_NODE_1686_length_1274_cov_5.467470_g996_i0 PRJNA169559 1686 1274 5.46747 69.6555678 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 523 2.6199999999999992e-182   NR TMW60420.1 41045 g996 i0 68.4 46.9356357927786 393 111 92.3 4 6 1181 1 381 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 59796 523 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
9293191 9293191 PRJNA169559_P_NODE_4368_length_807_cov_1.924165_g3133_i0 PRJNA169559 4368 807 1.924165 15.52801155 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 6.26e-35   NR GLE03027.1 114742 g3133 i0 46.4 8.71375464684015 168 75 62.5 3 641 138 59 211 GLE03027.1 hypothetical protein PINS_up011906 [Pythium insidiosum] diamond 7032 135 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
10569064 10569064 PRJNA169559_P_NODE_27709_length_278_cov_1.951807_g25633_i0 PRJNA169559 27709 278 1.951807 5.42602346 Phytophthora hydrogena 1286608 SAR_Eukaryotes SAR_Eukaryotes 169 2.44e-37   NTclustered gi|1233050041|gb|KX252277.1| 1286608 g25633 i0 84.524 60.2482014388489 168 26 60 0 1 168 181 14 Phytophthora hydrogena isolate 44G8(authentic) heat shock protein 90 gene, partial cds blastn 16749 169 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora hydrogena
11843697 11843697 PRJNA169559_P_NODE_45370_length_210_cov_5.149171_g43293_i0 PRJNA169559 45370 210 5.149171 10.8132591 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 102 1.8e-17   NTclustered gi|669149541|ref|XM_008612111.1| 1156394 g43293 i0 81.538 16.4761904761905 130 18 60 5 63 189 441 315 Saprolegnia diclina VS20 50S ribosomal protein L40e mRNA blastn 3460 102 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
13118825 13118825 PRJNA169559_P_NODE_33391_length_252_cov_2.026906_g31314_i0 PRJNA169559 33391 252 2.026906 5.10780312 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 89 1.33e-20   NR XP_012197784.1 695850 g31314 i0 81.6 2.30952380952381 49 9 58.3 0 147 1 1 49 XP_012197784.1 hypothetical protein SPRG_03794, partial [Saprolegnia parasitica CBS 223.65] diamond 582 89 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
18216910 18216910 PRJNA169559_P_NODE_9175_length_561_cov_2.494361_g7480_i0 PRJNA169559 9175 561 2.494361 13.99336521 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 76.8 3.28e-9   NTclustered gi|2794885173|ref|XM_067884476.1| 164328 g7480 i0 94 1.14081996434938 50 3 9 0 466 515 1970 2019 Phytophthora ramorum Senescence-specific cysteine protease SAG12 (KRP23_1382), partial mRNA blastn 640 76.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
18906268 18906268 PRJNA169559_P_NODE_2375_length_1071_cov_3.341651_g1498_i0 PRJNA169559 2375 1071 3.341651 35.78908221 root 1 Root_unresolved Root_unresolved 302 3.03e-97   NR XP_008605263.1 1156394 g1498 i0 48.7 7.55182072829132 341 165 94.1 6 56 1063 2 337 XP_008605263.1 hypothetical protein SDRG_01511 [Saprolegnia diclina VS20] diamond 8088 302 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
18906306 18906306 PRJNA169559_P_NODE_5435_length_728_cov_2.690987_g4058_i0 PRJNA169559 5435 728 2.690987 19.59038536 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 411 1.04e-109   NTclustered gi|2795021761|ref|XM_067936233.1| 4785 g4058 i0 81.569 64.9478021978022 510 82 69 10 59 562 1143 640 Phytophthora cinnamomi proline-tRNA ligase (IUM83_11660), partial mRNA blastn 47282 411 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
19490921 19490921 PRJNA169559_P_NODE_23516_length_321_cov_1.458904_g21443_i0 PRJNA169559 23516 321 1.458904 4.68308184 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 149 5.12e-39   NR RLN79760.1 2483409 g21443 i0 66 16.8411214953271 106 36 99.1 0 2 319 1077 1182 RLN79760.1 hypothetical protein BBJ28_00005928 [Nothophytophthora sp. Chile5] diamond 5406 149 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
20766633 20766633 PRJNA169559_P_NODE_43697_length_224_cov_2.123077_g41620_i0 PRJNA169559 43697 224 2.123077 4.7556924800000004 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 76.6 3.31e-14   NR OQS06413.1 74557 g41620 i0 65 4.08482142857143 60 20 80.4 1 215 36 645 703 OQS06413.1 choline/Carnitine O-acyltransferase [Thraustotheca clavata] diamond 915 76.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
23316959 23316959 PRJNA169559_P_NODE_13979_length_449_cov_2.757143_g12061_i0 PRJNA169559 13979 449 2.757143 12.37957207 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 172 3.2e-38   NTclustered gi|813117120|ref|XM_012340152.1| 695850 g12061 i0 80.603 26.9198218262806 232 38 51 6 59 288 1703 1477 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 12087 172 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
23317126 23317126 PRJNA169559_P_NODE_29559_length_267_cov_1.768908_g27483_i0 PRJNA169559 29559 267 1.768908 4.72298436 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 100 8.49e-24   NR RHZ41357.1 112090 g27483 i0 53.5 3.86516853932584 86 40 96.6 0 266 9 112 197 RHZ41357.1 hypothetical protein DYB31_011106 [Aphanomyces astaci] diamond 1032 100 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
28481345 28481345 PRJNA169559_P_NODE_7206_length_631_cov_3.669435_g2315_i1 PRJNA169559 7206 631 3.669435 23.15413485 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 149 1.22e-37   NR TMW56818.1 41045 g2315 i1 42.6 5.61014263074485 190 103 88 3 630 76 588 776 TMW56818.1 hypothetical protein Poli38472_006828 [Pythium oligandrum] diamond 3540 150 0.993333333333333 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28842259 28842259 PRJNA169559_P_NODE_4308_length_810_cov_7.300896_g3085_i0 PRJNA169559 4308 810 7.300896 59.1372576 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 137 1.57e-34   NR OQS00341.1 74557 g3085 i0 40.4 2.1 183 107 67.4 2 806 261 66 247 OQS00341.1 hypothetical protein THRCLA_06000 [Thraustotheca clavata] diamond 1701 137 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28968791 28968791 PRJNA169559_P_NODE_9508_length_551_cov_2.281609_g7790_i0 PRJNA169559 9508 551 2.281609 12.57166559 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 58.9 1.46e-6   NR KAG9412244.1 112091 g7790 i0 29.4 0.686025408348457 126 83 67.5 4 69 440 117 238 KAG9412244.1 hypothetical protein AC1031_015185 [Aphanomyces cochlioides] diamond 378 58.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
29965429 29965429 PRJNA169559_P_NODE_34891_length_248_cov_1.223744_g32814_i0 PRJNA169559 34891 248 1.223744 3.03488512 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00592   NR XP_024572466.1 4781 g32814 i0 76 3.75 25 6 30.2 0 246 172 254 278 XP_024572466.1 eukaryotic translation initiation factor 2 subunit 3 [Plasmopara halstedii] diamond 930 45.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
31780548 31780548 PRJNA169559_P_NODE_24717_length_306_cov_1.216606_g22641_i0 PRJNA169559 24717 306 1.216606 3.72281436 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 55.1 3.49e-6   NR XP_008871755.1 157072 g22641 i0 29.3 0.970588235294118 99 70 97.1 0 304 8 349 447 XP_008871755.1 AGC protein kinase [Aphanomyces invadans] diamond 297 55.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
32463046 32463046 PRJNA169559_P_NODE_19739_length_377_cov_5.192529_g17705_i0 PRJNA169559 19739 377 5.192529 19.57583433 root 1 Root_unresolved Root_unresolved 77.4 1.87e-14   NR RHY23617.1 157072 g17705 i0 58.6 1.51989389920424 58 23 45.4 1 78 248 46 103 RHY23617.1 hypothetical protein DYB32_009114 [Aphanomyces invadans] diamond 573 77.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;