RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA169559", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA169559 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26725327 26725327 PRJNA169559_P_NODE_26261_length_289_cov_2.226923_g24185_i0 PRJNA169559 26261 289 2.226923 6.43580747 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52.4 8.31e-6   NR XP_067773928.1 135588 g24185 i0 33.7 1.57785467128028 89 57 90.3 1 289 29 25 113 XP_067773928.1 centrin [Histomonas meleagridis] diamond 456 52.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
32603163 32603163 PRJNA169559_P_NODE_33400_length_252_cov_1.937220_g31323_i0 PRJNA169559 33400 252 1.93722 4.8817944 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 60.1 1.04e-8   NR XP_068346228.1 1144522 g31323 i0 49.2 2.75 61 31 72.6 0 18 200 111 171 XP_068346228.1 small GTP-binding protein [Tritrichomonas foetus] diamond 693 60.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;