RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA169559", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA169559 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6742578 6742578 PRJNA169559_P_NODE_17906_length_402_cov_4.455764_g15907_i0 PRJNA169559 17906 402 4.455764 17.91217128 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 279 1.62e-70   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g15907 i0 86.434 30.2338308457711 258 32 64 3 139 395 385068 385323 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 12154 279 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
11843678 11843678 PRJNA169559_P_NODE_42470_length_228_cov_4.452261_g40393_i0 PRJNA169559 42470 228 4.452261 10.15115508 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 159 1.1599999999999999e-34   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g40393 i0 82.353 46.4298245614035 187 29 81 3 44 228 386234 386050 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 10586 159 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
16942268 16942268 PRJNA169559_P_NODE_27094_length_282_cov_4.035573_g25018_i0 PRJNA169559 27094 282 4.035573 11.38031586 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 339 1.78e-88   NTclustered gi|1958002018|gb|CP064958.1| 2052152 g25018 i0 88.339 75.3014184397163 283 31 100 2 1 282 137331 137612 MAG: Candidatus Nomurabacteria bacterium isolate AalW_18-Q3-R10-53_BAT3C.395 chromosome, complete genome blastn 21235 339 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;