RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA169559" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA169559 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4192032 4192032 PRJNA169559_P_NODE_2304_length_1085_cov_5.694129_g1443_i0 PRJNA169559 2304 1085 5.694129 61.78129965 Thecamonas trahens 529818 Root_unresolved Root_unresolved 427 1.57e-114   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g1443 i0 76.477 16.1336405529954 863 157 77 33 147 986 1037 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 17505 427 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27136705 27136705 PRJNA169559_P_NODE_1602_length_1300_cov_5.748230_g942_i0 PRJNA169559 1602 1300 5.74823 74.72699 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 84.7 2.94e-13   NR XP_013753529.1 461836 g942 i0 34.9 0.383076923076923 166 94 36.9 5 148 627 110 267 XP_013753529.1 uncharacterized protein AMSG_12365 [Thecamonas trahens ATCC 50062] diamond 498 84.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27295186 27295186 PRJNA169559_P_NODE_38343_length_239_cov_1.423810_g36266_i0 PRJNA169559 38343 239 1.42381 3.4029059 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 70.1 3.45e-12   NR XP_013762722.1 461836 g36266 i0 50 1.68200836820084 66 29 82.8 1 40 237 51 112 XP_013762722.1 Park2 co-regulated [Thecamonas trahens ATCC 50062] diamond 402 70.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29997098 29997098 PRJNA169559_P_NODE_5431_length_728_cov_3.204578_g4054_i0 PRJNA169559 5431 728 3.204578 23.32932784 root 1 Root_unresolved Root_unresolved 99 1.3e-21   NR XP_013753426.1 461836 g4054 i0 46.9 1.82554945054945 113 59 46.2 1 110 445 40 152 XP_013753426.1 uncharacterized protein AMSG_10226 [Thecamonas trahens ATCC 50062] diamond 1329 99.8 0.991983967935872 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;