RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA168635" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA168635 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29189866 29189866 PRJNA168635_P_NODE_23129_length_173_cov_4.467742_g22713_i0 PRJNA168635 23129 173 4.467742 7.72919366 Promethearchaeota archaeon 2053489 Archaea Archaea 82 7.31e-17   NR MBD3350020.1 2053489 g22713 i0 61.4 0.988439306358382 57 22 98.8 0 3 173 46 102 MBD3350020.1 DUF4419 domain-containing protein [Promethearchaeota archaeon] diamond 171 82 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;