RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA168635" and tax_phylum = "Candidatus Portnoyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Portnoyibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29726188 29726188 PRJNA168635_P_NODE_12770_length_227_cov_4.775281_g12354_i0 PRJNA168635 12770 227 4.775281 10.83988787 Candidatus Portnoybacteria bacterium CG1 2053593 Bacteria Bacteria 52 3.8e-6   NR PJE60061.1 1974816 g12354 i0 61.9 0.555066079295154 42 16 55.5 0 129 4 84 125 PJE60061.1 MAG: hypothetical protein COU85_00230 [Candidatus Portnoybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_7] diamond 126 52 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG10_big_fil_rev_8_21_14_0_10_44_7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;