RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA168635" and tax_phylum = "Candidatus Methanomethylicota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methanomethylicota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA168635 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32729117 32729117 PRJNA168635_P_NODE_26480_length_168_cov_0.873950_g26064_i0 PRJNA168635 26480 168 0.87395 1.468236 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 46.6 5.76e-4   NR MEM4721811.1 3058293 g26064 i0 44.7 0.839285714285714 47 26 83.9 0 26 166 141 187 MEM4721811.1 DnaB-like helicase C-terminal domain-containing protein [Candidatus Methanomethylicaceae archaeon] diamond 141 46.6 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;