RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA168635" and tax_phylum = "Candidatus Magasanikiibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16941686 16941686 PRJNA168635_P_NODE_20894_length_179_cov_3.169231_g20478_i0 PRJNA168635 20894 179 3.169231 5.67292349 Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8 1619036 Bacteria Bacteria 296 6.34e-76   NTclustered gi|1118703600|gb|KX123513.1| 1619036 g20478 i0 96.629 98.9106145251397 178 6 99 0 2 179 340 517 Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8 16S ribosomal RNA gene, partial sequence blastn 17705 296 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8
27611123 27611123 PRJNA168635_P_NODE_26484_length_168_cov_0.873950_g26068_i0 PRJNA168635 26484 168 0.87395 1.468236 Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_39_9 1798708 Bacteria Bacteria 116 9.74e-29   NR OGH92940.1 1798708 g26068 i0 98.2 0.982142857142857 55 1 98.2 0 167 3 323 377 OGH92940.1 MAG: threonine--tRNA ligase [Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_39_9] diamond 165 116 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_39_9
28273917 28273917 PRJNA168635_P_NODE_30526_length_163_cov_2.236842_g30110_i0 PRJNA168635 30526 163 2.236842 3.64605246 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 65.5 7.18e-12   NR MCX6779287.1 2026717 g30110 i0 64.6 1.74846625766871 48 17 88.3 0 152 9 25 72 MCX6779287.1 matrixin family metalloprotease [Candidatus Magasanikiibacteriota bacterium] diamond 285 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium
28418381 28418381 PRJNA168635_P_NODE_33606_length_157_cov_3.666667_g33190_i0 PRJNA168635 33606 157 3.666667 5.75666719 Bacteria 2 Bacteria Bacteria 52.8 2.65e-6   NR MBT4120450.1 2026717 g33190 i0 67.7 6.38216560509554 31 10 59.2 0 155 63 222 252 MBT4120450.1 orotidine-5'-phosphate decarboxylase [Candidatus Magasanikiibacteriota bacterium] diamond 1002 53.1 0.994350282485876 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;