RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA168635" and tax_phylum = "Candidatus Doudnaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Doudnaibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA168635 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26598769 26598769 PRJNA168635_P_NODE_27681_length_166_cov_2.324786_g27265_i0 PRJNA168635 27681 166 2.324786 3.85914476 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 94.7 6.050000000000001e-21   NR MBP9686685.1 2052150 g27265 i0 76 0.903614457831325 50 12 90.4 0 1 150 120 169 MBP9686685.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 150 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
28052967 28052967 PRJNA168635_P_NODE_24045_length_171_cov_2.639344_g23629_i0 PRJNA168635 24045 171 2.639344 4.51327824 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 62 2.21e-9   NR MBI5530980.1 2052150 g23629 i0 61.2 1.73684210526316 49 19 86 0 169 23 574 622 MBI5530980.1 hypothetical protein [Candidatus Doudnabacteria bacterium] diamond 297 62 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
28558369 28558369 PRJNA168635_P_NODE_23267_length_173_cov_2.032258_g22851_i0 PRJNA168635 23267 173 2.032258 3.51580634 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 73.6 1.27e-13   NR MBL8029913.1 2052150 g22851 i0 61.8 0.953757225433526 55 21 95.4 0 172 8 271 325 MBL8029913.1 tryptophan--tRNA ligase [Candidatus Doudnabacteria bacterium] diamond 165 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;