contig_metadata
58 rows where bioproject = "PRJNA168635" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 364535 | 364535 | PRJNA168635_P_NODE_29961_length_164_cov_0.904348_g29545_i0 | PRJNA168635 | 29961 | 164 | 0.904348 | 1.48313072 | Sulfurospirillum diekertiae | 1854492 | Bacteria | Bacteria | 270 | 3.4699999999999992e-68 | NTclustered | gi|1905313802|gb|CP045453.2| | 1854492 | g29545 | i0 | 96.341 | 4.9390243902439 | 164 | 6 | 100 | 0 | 1 | 164 | 18013 | 18176 | Sulfurospirillum diekertiae strain ACSTCE chromosome, complete genome | blastn | 810 | 270 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum diekertiae | ||
| 1639169 | 1639169 | PRJNA168635_P_NODE_15282_length_205_cov_4.076923_g14866_i0 | PRJNA168635 | 15282 | 205 | 4.076923 | 8.35769215 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 292 | 9.69e-75 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g14866 | i0 | 100 | 166.048780487805 | 158 | 0 | 100 | 0 | 48 | 205 | 203235 | 203392 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 34040 | 292 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 2329673 | 2329673 | PRJNA168635_P_NODE_7542_length_307_cov_99.542636_g7130_i0 | PRJNA168635 | 7542 | 307 | 99.542636 | 305.59589252 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 534 | 2.33e-147 | NTclustered | gi|507148369|ref|NR_103172.1| | 44674 | g7130 | i0 | 98.046 | 362.078175895765 | 307 | 6 | 100 | 0 | 1 | 307 | 1637 | 1943 | Sulfurospirillum barnesii strain SES-3 23S ribosomal RNA gene, complete sequence | blastn | 111158 | 534 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum barnesii | ||
| 4191387 | 4191387 | PRJNA168635_P_NODE_11724_length_239_cov_2.010526_g11308_i0 | PRJNA168635 | 11724 | 239 | 2.010526 | 4.80515714 | Campylobacter showae | 204 | Bacteria | Bacteria | 436 | 5.0799999999999985e-118 | NTclustered | gi|1483583511|emb|LT631435.1| | 204 | g11308 | i0 | 99.582 | 232.543933054393 | 239 | 1 | 100 | 0 | 1 | 239 | 10409 | 10647 | Campylobacter showae genome assembly, plasmid: XI | blastn | 55578 | 436 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 4191733 | 4191733 | PRJNA168635_P_NODE_32724_length_160_cov_4.882883_g32308_i0 | PRJNA168635 | 32724 | 160 | 4.882883 | 7.8126128 | Candidatus Sulfuricurvum sp. RIFRC-1 | 1249480 | Bacteria | Bacteria | 270 | 3.3699999999999993e-68 | NTclustered | gi|410994849|gb|CP003920.1| | 1249480 | g32308 | i0 | 97.484 | 141.0625 | 159 | 3 | 99 | 1 | 1 | 159 | 644746 | 644589 | Candidatus Sulfuricurvum sp. RIFRC-1, complete genome | blastn | 22570 | 270 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Candidatus Sulfuricurvum sp. RIFRC-1 | ||
| 4882173 | 4882173 | PRJNA168635_P_NODE_18264_length_188_cov_3.920863_g17848_i0 | PRJNA168635 | 18264 | 188 | 3.920863 | 7.37122244 | Campylobacter | 194 | Bacteria | Bacteria | 348 | 1.84e-91 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g17848 | i0 | 100 | 275.984042553192 | 188 | 0 | 100 | 0 | 1 | 188 | 30550 | 30737 | Campylobacter showae genome assembly, plasmid: V | blastn | 51885 | 348 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 4882192 | 4882192 | PRJNA168635_P_NODE_2084_length_559_cov_8.741176_g1712_i0 | PRJNA168635 | 2084 | 559 | 8.741176 | 48.86317384 | Sulfuricurvum | 286130 | Bacteria | Bacteria | 896 | 0 | NTclustered | gi|470487282|ref|NR_076811.1| | 148813 | g1712 | i0 | 96.33 | 313.270125223614 | 545 | 20 | 97 | 0 | 15 | 559 | 547 | 3 | Sulfuricurvum kujiense strain YK-1 23S ribosomal RNA gene, complete sequence | blastn | 175118 | 896 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum kujiense | ||
| 6157146 | 6157146 | PRJNA168635_P_NODE_9325_length_273_cov_9.227679_g8910_i0 | PRJNA168635 | 9325 | 273 | 9.227679 | 25.19156367 | Aliarcobacter | 2321111 | Bacteria | Bacteria | 488 | 1.6099999999999996e-133 | NTclustered | gi|290877936|emb|FN600702.1| | 28198 | g8910 | i0 | 99.259 | 376.758241758242 | 270 | 2 | 99 | 0 | 4 | 273 | 1319 | 1050 | Arcobacter cryaerophilus partial 23S rRNA gene, strain LMG 10209, biovar 1B | blastn | 102855 | 488 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 6742352 | 6742352 | PRJNA168635_P_NODE_35466_length_151_cov_5.088235_g35050_i0 | PRJNA168635 | 35466 | 151 | 5.088235 | 7.68323485 | uncultured Campylobacterota bacterium | 120858 | Bacteria | Bacteria | 213 | 5.34e-51 | NTclustered | gi|346681549|gb|JF740663.1| | 120858 | g35050 | i0 | 92.617 | 120.596026490066 | 149 | 10 | 98 | 1 | 1 | 148 | 53 | 201 | Uncultured epsilon proteobacterium clone 23S_S3M_206 23S ribosomal RNA gene, partial sequence | blastn | 18210 | 213 | 1 | Bacteria | Pseudomonadati | Campylobacterota | uncultured Campylobacterota bacterium | ||||||
| 6742420 | 6742420 | PRJNA168635_P_NODE_6566_length_330_cov_15.088968_g6155_i0 | PRJNA168635 | 6566 | 330 | 15.088968 | 49.7935944 | Candidatus Thiovulum stygium | 2951083 | Bacteria | Bacteria | 523 | 5.479999999999998e-144 | NTclustered | gi|2182967327|gb|CP091137.1| | 2951083 | g6155 | i0 | 95.427 | 169.781818181818 | 328 | 15 | 99 | 0 | 1 | 328 | 566135 | 566462 | MAG: Candidatus Thiovulum stygium isolate 07-Movile_MetG_Ill chromosome, complete genome | blastn | 56028 | 523 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Thiovulum | Candidatus Thiovulum stygium | ||
| 8018134 | 8018134 | PRJNA168635_P_NODE_9987_length_262_cov_8.488263_g9572_i0 | PRJNA168635 | 9987 | 262 | 8.488263 | 22.23924906 | Campylobacter sp. GTC17093 | 3382266 | Bacteria | Bacteria | 446 | 9.379999999999998e-121 | NTclustered | gi|2866683719|dbj|AP038832.1| | 3382266 | g9572 | i0 | 97.328 | 255.889312977099 | 262 | 7 | 100 | 0 | 1 | 262 | 47402 | 47663 | Campylobacter sp. GTC17093 DNA, complete genome | blastn | 67043 | 446 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. GTC17093 | ||
| 10568494 | 10568494 | PRJNA168635_P_NODE_19609_length_183_cov_20.985075_g19193_i0 | PRJNA168635 | 19609 | 183 | 20.985075 | 38.40268725 | Halarcobacter bivalviorum | 663364 | Bacteria | Bacteria | 143 | 8.989999999999998e-30 | NTclustered | gi|1435902972|gb|CP031217.1| | 663364 | g19193 | i0 | 92.157 | 81.2513661202186 | 102 | 6 | 84 | 2 | 1 | 101 | 343877 | 343777 | Halarcobacter bivalviorum strain LMG 26154 chromosome, complete genome | blastn | 14869 | 143 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Halarcobacter | Halarcobacter bivalviorum | ||
| 11257594 | 11257594 | PRJNA168635_P_NODE_35369_length_152_cov_2.009709_g34953_i0 | PRJNA168635 | 35369 | 152 | 2.009709 | 3.05475768 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 248 | 1.48e-61 | NTclustered | gi|1729059542|gb|CP042966.1| | 66821 | g34953 | i0 | 96.644 | 12.8421052631579 | 149 | 5 | 98 | 0 | 2 | 150 | 773323 | 773175 | Sulfurospirillum multivorans strain N chromosome, complete genome | blastn | 1952 | 248 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum multivorans | ||
| 11257624 | 11257624 | PRJNA168635_P_NODE_6609_length_329_cov_50.857143_g6198_i0 | PRJNA168635 | 6609 | 329 | 50.857143 | 167.32000047 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 464 | 3.3599999999999995e-126 | NTclustered | gi|757804896|dbj|AP014724.1| | 366522 | g6198 | i0 | 92.145 | 125.480243161094 | 331 | 23 | 100 | 3 | 1 | 329 | 49337 | 49666 | Sulfurospirillum cavolei DNA, complete genome | blastn | 41283 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum cavolei | ||
| 12532853 | 12532853 | PRJNA168635_P_NODE_20210_length_181_cov_5.878788_g19794_i0 | PRJNA168635 | 20210 | 181 | 5.878788 | 10.64060628 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 326 | 8.2e-85 | NTclustered | gi|1231709647|emb|LT906455.1| | 28197 | g19794 | i0 | 98.907 | 270.28729281768 | 183 | 0 | 100 | 2 | 1 | 181 | 847636 | 847454 | Arcobacter butzleri strain NCTC12481 genome assembly, chromosome: 1 | blastn | 48922 | 326 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter butzleri | ||
| 13118224 | 13118224 | PRJNA168635_P_NODE_19671_length_183_cov_3.626866_g19255_i0 | PRJNA168635 | 19671 | 183 | 3.626866 | 6.63716478 | Desulfurella acetivorans | 33002 | Bacteria | Bacteria | 126 | 9.05e-25 | NTclustered | gi|662020107|ref|NR_121994.1| | 33002 | g19255 | i0 | 91.304 | 65.9016393442623 | 92 | 8 | 50 | 0 | 64 | 155 | 264 | 173 | Desulfurella acetivorans strain A63 23S ribosomal RNA, complete sequence | blastn | 12060 | 126 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellaceae | Desulfurella | Desulfurella acetivorans | ||
| 13118407 | 13118407 | PRJNA168635_P_NODE_3131_length_470_cov_38.828979_g2735_i0 | PRJNA168635 | 3131 | 470 | 38.828979 | 182.4962013 | Helicobacter sp. | 218 | Bacteria | Bacteria | 261 | 6.97e-65 | NTclustered | gi|1917981504|gb|MW147610.1| | 218 | g2735 | i0 | 80.833 | 81.231914893617 | 360 | 46 | 74 | 16 | 1 | 349 | 845 | 1192 | Helicobacter sp. strain MIT 16-1345 16S ribosomal RNA gene, partial sequence | blastn | 38179 | 261 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 14393491 | 14393491 | PRJNA168635_P_NODE_15892_length_201_cov_1.368421_g15476_i0 | PRJNA168635 | 15892 | 201 | 1.368421 | 2.75052621 | Sulfurospirillum halorespirans | 194424 | Bacteria | Bacteria | 333 | 5.569999999999999e-87 | NTclustered | gi|1063807422|gb|CP017111.1| | 1193502 | g15476 | i0 | 96.517 | 13.5124378109453 | 201 | 7 | 100 | 0 | 1 | 201 | 478215 | 478415 | Sulfurospirillum halorespirans DSM 13726 chromosome, complete genome | blastn | 2716 | 333 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum halorespirans | ||
| 14393596 | 14393596 | PRJNA168635_P_NODE_22292_length_175_cov_5.119048_g21876_i0 | PRJNA168635 | 22292 | 175 | 5.119048 | 8.958334 | Sulfurospirillum sp. | 2053622 | Bacteria | Bacteria | 99 | 1.16e-22 | NR | WP_333803353.1 | 2053622 | g21876 | i0 | 84.7 | 1.01142857142857 | 59 | 8 | 99.4 | 1 | 175 | 2 | 84 | 142 | WP_333803353.1 OprD family outer membrane porin [Sulfurospirillum sp.] | diamond | 177 | 99 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum sp. | ||
| 15081773 | 15081773 | PRJNA168635_P_NODE_1772_length_601_cov_85.836957_g1414_i0 | PRJNA168635 | 1772 | 601 | 85.836957 | 515.88011157 | Sulfuricurvum | 286130 | Bacteria | Bacteria | 839 | 0 | NTclustered | gi|470487282|ref|NR_076811.1| | 148813 | g1414 | i0 | 91.914 | 278.534109816972 | 606 | 40 | 100 | 9 | 1 | 601 | 1950 | 1349 | Sulfuricurvum kujiense strain YK-1 23S ribosomal RNA gene, complete sequence | blastn | 167399 | 845 | 0.992899408284024 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum kujiense | ||
| 15667222 | 15667222 | PRJNA168635_P_NODE_17413_length_192_cov_1.300699_g16997_i0 | PRJNA168635 | 17413 | 192 | 1.300699 | 2.49734208 | Campylobacter showae | 204 | Bacteria | Bacteria | 350 | 5.24e-92 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g16997 | i0 | 99.479 | 229.026041666667 | 192 | 1 | 100 | 0 | 1 | 192 | 390725 | 390534 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 43973 | 350 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 20766091 | 20766091 | PRJNA168635_P_NODE_26737_length_167_cov_2.838983_g26321_i0 | PRJNA168635 | 26737 | 167 | 2.838983 | 4.74110161 | Arcobacteraceae bacterium | 2808971 | Bacteria | Bacteria | 182 | 1.71e-41 | NTclustered | gi|2621786048|emb|OY782506.1| | 2808971 | g26321 | i0 | 86.391 | 255.203592814371 | 169 | 19 | 100 | 4 | 1 | 167 | 786372 | 786538 | MAG: Arcobacteraceae bacterium isolate 46883acb-a361-43ba-a1df-3f0e2b68257b genome assembly, chromosome: 1 | blastn | 42619 | 182 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacteraceae bacterium | |||
| 21456037 | 21456037 | PRJNA168635_P_NODE_21797_length_177_cov_1.390625_g21381_i0 | PRJNA168635 | 21797 | 177 | 1.390625 | 2.46140625 | Campylobacter | 194 | Bacteria | Bacteria | 226 | 8.329999999999998e-55 | NTclustered | gi|1590155399|gb|CP037747.1| | 28898 | g21381 | i0 | 89.944 | 264.966101694915 | 179 | 13 | 100 | 4 | 1 | 177 | 534586 | 534761 | Campylobacter helveticus strain 2013D-9613 chromosome, complete genome | blastn | 46899 | 226 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter helveticus | ||
| 21456056 | 21456056 | PRJNA168635_P_NODE_23477_length_172_cov_9.081301_g23061_i0 | PRJNA168635 | 23477 | 172 | 9.081301 | 15.61983772 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 313 | 5.989999999999998e-81 | NTclustered | gi|1847324382|gb|CP053840.1| | 1054033 | g23061 | i0 | 99.419 | 396.52325581395303 | 172 | 1 | 100 | 0 | 1 | 172 | 2091786 | 2091615 | Arcobacter venerupis strain LMG 26156 chromosome, complete genome | blastn | 68202 | 313 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter venerupis | ||
| 21456069 | 21456069 | PRJNA168635_P_NODE_25357_length_169_cov_0.866667_g24941_i0 | PRJNA168635 | 25357 | 169 | 0.866667 | 1.46466723 | Campylobacter | 194 | Bacteria | Bacteria | 108 | 2.97e-19 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g24941 | i0 | 90.244 | 140.988165680473 | 82 | 8 | 49 | 0 | 11 | 92 | 28511 | 28430 | Campylobacter showae genome assembly, plasmid: V | blastn | 23827 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 21456155 | 21456155 | PRJNA168635_P_NODE_4317_length_405_cov_3.129213_g3915_i0 | PRJNA168635 | 4317 | 405 | 3.129213 | 12.67331265 | Campylobacter | 194 | Bacteria | Bacteria | 113 | 1.76e-20 | NTclustered | gi|1861380260|gb|CP053831.1| | 202 | g3915 | i0 | 80.69 | 54.6 | 145 | 28 | 36 | 0 | 47 | 191 | 608303 | 608447 | Campylobacter mucosalis strain ATCC 43264 chromosome, complete genome | blastn | 22113 | 113 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter mucosalis | ||
| 21456192 | 21456192 | PRJNA168635_P_NODE_7917_length_300_cov_18.370518_g7504_i0 | PRJNA168635 | 7917 | 300 | 18.370518 | 55.111554 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 532 | 8.18e-147 | NTclustered | gi|1847339566|gb|CP053833.1| | 1054034 | g7504 | i0 | 99.658 | 336.256666666667 | 292 | 0 | 98 | 1 | 1 | 292 | 919214 | 919504 | Arcobacter cloacae strain LMG 26153 chromosome, complete genome | blastn | 100877 | 532 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter cloacae | ||
| 22040996 | 22040996 | PRJNA168635_P_NODE_16178_length_199_cov_1.533333_g15762_i0 | PRJNA168635 | 16178 | 199 | 1.533333 | 3.05133267 | Sulfurospirillum halorespirans | 194424 | Bacteria | Bacteria | 237 | 4.44e-58 | NTclustered | gi|1063807422|gb|CP017111.1| | 1193502 | g15762 | i0 | 88.384 | 39.0201005025126 | 198 | 22 | 99 | 1 | 3 | 199 | 685170 | 684973 | Sulfurospirillum halorespirans DSM 13726 chromosome, complete genome | blastn | 7765 | 237 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum halorespirans | ||
| 22731020 | 22731020 | PRJNA168635_P_NODE_21518_length_177_cov_16.000000_g21102_i0 | PRJNA168635 | 21518 | 177 | 16 | 28.32 | Campylobacter | 194 | Bacteria | Bacteria | 327 | 2.2199999999999996e-85 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g21102 | i0 | 100 | 268.180790960452 | 177 | 0 | 100 | 0 | 1 | 177 | 31153 | 31329 | Campylobacter showae genome assembly, plasmid: V | blastn | 47468 | 327 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 24006282 | 24006282 | PRJNA168635_P_NODE_32539_length_161_cov_3.383929_g32123_i0 | PRJNA168635 | 32539 | 161 | 3.383929 | 5.44812569 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|34868921|gb|AY314755.1| | 28198 | g32123 | i0 | 100 | 123.496894409938 | 161 | 0 | 100 | 0 | 1 | 161 | 302 | 142 | Arcobacter cryaerophilus isolate CCUG 17802 16S ribosomal RNA gene, partial sequence | blastn | 19883 | 298 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 25280473 | 25280473 | PRJNA168635_P_NODE_9500_length_270_cov_12.597285_g9085_i0 | PRJNA168635 | 9500 | 270 | 12.597285 | 34.0126695 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 499 | 7.349999999999998e-137 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g9085 | i0 | 100 | 422.82962962963 | 270 | 0 | 100 | 0 | 1 | 270 | 1011502 | 1011233 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 114164 | 499 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 26693999 | 26693999 | PRJNA168635_P_NODE_31221_length_163_cov_0.912281_g30805_i0 | PRJNA168635 | 31221 | 163 | 0.912281 | 1.48701803 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 43.9 | 0.00484 | NR | TXH52673.1 | 2482794 | g30805 | i0 | 50 | 0.883435582822086 | 48 | 24 | 88.3 | 0 | 158 | 15 | 351 | 398 | TXH52673.1 MAG: DUF2793 domain-containing protein [Desulfurellales bacterium] | diamond | 144 | 43.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 26852656 | 26852656 | PRJNA168635_P_NODE_19221_length_185_cov_1.514706_g18805_i0 | PRJNA168635 | 19221 | 185 | 1.514706 | 2.8022061 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 56.2 | 2.98e-7 | NR | TXH56868.1 | 2482794 | g18805 | i0 | 58 | 0.810810810810811 | 50 | 21 | 81.1 | 0 | 183 | 34 | 277 | 326 | TXH56868.1 MAG: hypothetical protein E6Q97_05590 [Desulfurellales bacterium] | diamond | 150 | 56.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 27249757 | 27249757 | PRJNA168635_P_NODE_27643_length_166_cov_2.905983_g27227_i0 | PRJNA168635 | 27643 | 166 | 2.905983 | 4.82393178 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 70.9 | 3.62e-13 | NR | WP_039673726.1 | 57665 | g27227 | i0 | 92.1 | 1.37349397590361 | 38 | 3 | 68.7 | 0 | 53 | 166 | 1 | 38 | WP_039673726.1 MULTISPECIES: response regulator transcription factor [Sulfurospirillum] | diamond | 228 | 71.6 | 0.990223463687151 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | |||
| 27439660 | 27439660 | PRJNA168635_P_NODE_26323_length_168_cov_0.873950_g25907_i0 | PRJNA168635 | 26323 | 168 | 0.87395 | 1.468236 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 110 | 1.25e-26 | NR | WP_223809708.1 | 66821 | g25907 | i0 | 90.9 | 4.91071428571429 | 55 | 5 | 98.2 | 0 | 3 | 167 | 545 | 599 | WP_223809708.1 GGDEF domain-containing protein [Sulfurospirillum multivorans] | diamond | 825 | 111 | 0.990990990990991 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum multivorans | ||
| 27579398 | 27579398 | PRJNA168635_P_NODE_34984_length_153_cov_2.788462_g34568_i0 | PRJNA168635 | 34984 | 153 | 2.788462 | 4.26634686 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 109 | 2.88e-26 | NR | TXH46783.1 | 2482794 | g34568 | i0 | 98 | 1 | 51 | 1 | 100 | 0 | 153 | 1 | 134 | 184 | TXH46783.1 MAG: hypothetical protein E6Q97_28800 [Desulfurellales bacterium] | diamond | 153 | 109 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 28084500 | 28084500 | PRJNA168635_P_NODE_20405_length_181_cov_1.537879_g19989_i0 | PRJNA168635 | 20405 | 181 | 1.537879 | 2.78356099 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 43.9 | 0.00128 | NR | TXH50991.1 | 2482794 | g19989 | i0 | 44.4 | 0.74585635359116 | 45 | 25 | 74.6 | 0 | 1 | 135 | 6 | 50 | TXH50991.1 MAG: hypothetical protein E6Q97_19300 [Desulfurellales bacterium] | diamond | 135 | 43.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 28179072 | 28179072 | PRJNA168635_P_NODE_20406_length_181_cov_1.530303_g19990_i0 | PRJNA168635 | 20406 | 181 | 1.530303 | 2.76984843 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 70.5 | 1.6e-12 | NR | TXH46772.1 | 2482794 | g19990 | i0 | 91.7 | 0.596685082872928 | 36 | 3 | 59.7 | 0 | 113 | 6 | 1 | 36 | TXH46772.1 MAG: hypothetical protein E6Q97_28745 [Desulfurellales bacterium] | diamond | 108 | 70.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 28400356 | 28400356 | PRJNA168635_P_NODE_18826_length_186_cov_3.021898_g18410_i0 | PRJNA168635 | 18826 | 186 | 3.021898 | 5.62073028 | Sulfurospirillum halorespirans | 194424 | Bacteria | Bacteria | 108 | 6.75e-29 | NR | WP_069477120.1 | 194424 | g18410 | i0 | 88.1 | 0.951612903225806 | 59 | 7 | 95.2 | 0 | 178 | 2 | 1 | 59 | WP_069477120.1 c-type cytochrome [Sulfurospirillum halorespirans] | diamond | 177 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum halorespirans | ||
| 28589962 | 28589962 | PRJNA168635_P_NODE_34367_length_155_cov_2.518868_g33951_i0 | PRJNA168635 | 34367 | 155 | 2.518868 | 3.9042454 | Campylobacterota bacterium | 2026809 | Bacteria | Bacteria | 47.4 | 6.76e-5 | NR | MEA3330616.1 | 2026809 | g33951 | i0 | 46.7 | 0.870967741935484 | 45 | 22 | 87.1 | 1 | 135 | 1 | 28 | 70 | MEA3330616.1 hypothetical protein [Campylobacterota bacterium] | diamond | 135 | 47.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Campylobacterota bacterium | ||||||
| 28873918 | 28873918 | PRJNA168635_P_NODE_31028_length_163_cov_0.912281_g30612_i0 | PRJNA168635 | 31028 | 163 | 0.912281 | 1.48701803 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 44.3 | 0.0036 | NR | TXH57904.1 | 2482794 | g30612 | i0 | 68.6 | 0.644171779141104 | 35 | 11 | 64.4 | 0 | 55 | 159 | 1 | 35 | TXH57904.1 MAG: hypothetical protein E6Q97_03460 [Desulfurellales bacterium] | diamond | 105 | 44.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 28937204 | 28937204 | PRJNA168635_P_NODE_17408_length_192_cov_1.328671_g16992_i0 | PRJNA168635 | 17408 | 192 | 1.328671 | 2.55104832 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 59.7 | 5.11e-10 | NR | TXH55990.1 | 2482794 | g16992 | i0 | 69.8 | 0.671875 | 43 | 13 | 67.2 | 0 | 129 | 1 | 3 | 45 | TXH55990.1 MAG: hypothetical protein E6Q97_07495 [Desulfurellales bacterium] | diamond | 129 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 29221467 | 29221467 | PRJNA168635_P_NODE_24409_length_170_cov_3.867769_g23993_i0 | PRJNA168635 | 24409 | 170 | 3.867769 | 6.5752073 | Sulfurospirillum cavolei | 366522 | Bacteria | Bacteria | 50.4 | 2.65e-5 | NR | WP_060824986.1 | 366522 | g23993 | i0 | 76.8 | 0.988235294117647 | 56 | 13 | 98.8 | 0 | 3 | 170 | 576 | 631 | WP_060824986.1 flagellin [Sulfurospirillum cavolei] | diamond | 168 | 50.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum cavolei | ||
| 29379178 | 29379178 | PRJNA168635_P_NODE_12609_length_229_cov_2.094444_g12193_i0 | PRJNA168635 | 12609 | 229 | 2.094444 | 4.79627676 | Campylobacterales bacterium | 2268180 | Bacteria | Bacteria | 49.3 | 7.14e-6 | NR | MDD3466134.1 | 2268180 | g12193 | i0 | 58.2 | 0.720524017467249 | 55 | 15 | 68.1 | 2 | 204 | 49 | 1 | 50 | MDD3466134.1 hypothetical protein [Campylobacterales bacterium] | diamond | 165 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacterales bacterium | ||||
| 29617629 | 29617629 | PRJNA168635_P_NODE_33050_length_159_cov_3.381818_g32634_i0 | PRJNA168635 | 33050 | 159 | 3.381818 | 5.37709062 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 98.6 | 1.1200000000000001e-22 | NR | WP_014768443.1 | 44674 | g32634 | i0 | 96.2 | 1.9622641509434 | 52 | 2 | 98.1 | 0 | 2 | 157 | 337 | 388 | WP_014768443.1 diaminopimelate decarboxylase [Sulfurospirillum barnesii] | diamond | 312 | 98.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum barnesii | ||
| 30516223 | 30516223 | PRJNA168635_P_NODE_30153_length_164_cov_0.904348_g29737_i0 | PRJNA168635 | 30153 | 164 | 0.904348 | 1.48313072 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 108 | 3.9899999999999997e-28 | NR | TXH52637.1 | 2482794 | g29737 | i0 | 85.2 | 0.98780487804878 | 54 | 8 | 98.8 | 0 | 1 | 162 | 105 | 158 | TXH52637.1 MAG: hypothetical protein E6Q97_15300 [Desulfurellales bacterium] | diamond | 162 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 30769103 | 30769103 | PRJNA168635_P_NODE_32234_length_162_cov_0.920354_g31818_i0 | PRJNA168635 | 32234 | 162 | 0.920354 | 1.49097348 | Aliarcobacter sp. | 2321116 | Bacteria | Bacteria | 41.2 | 0.029 | NR | MFA7087640.1 | 2321116 | g31818 | i0 | 45.8 | 0.888888888888889 | 48 | 26 | 88.9 | 0 | 160 | 17 | 56 | 103 | MFA7087640.1 hypothetical protein [Aliarcobacter sp.] | diamond | 144 | 41.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter sp. | ||
| 30800491 | 30800491 | PRJNA168635_P_NODE_27394_length_167_cov_0.881356_g26978_i0 | PRJNA168635 | 27394 | 167 | 0.881356 | 1.47186452 | Campylobacterales bacterium | 2268180 | Bacteria | Bacteria | 72 | 6.16e-13 | NR | MDD3466111.1 | 2268180 | g26978 | i0 | 63.8 | 1.04191616766467 | 58 | 18 | 98.8 | 1 | 165 | 1 | 195 | 252 | MDD3466111.1 hypothetical protein [Campylobacterales bacterium] | diamond | 174 | 72 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacterales bacterium | ||||
| 30990329 | 30990329 | PRJNA168635_P_NODE_22994_length_174_cov_1.464000_g22578_i0 | PRJNA168635 | 22994 | 174 | 1.464 | 2.54736 | Campylobacterales bacterium | 2268180 | Bacteria | Bacteria | 84.7 | 3.61e-18 | NR | HOI83285.1 | 2268180 | g22578 | i0 | 79.3 | 1 | 58 | 12 | 100 | 0 | 174 | 1 | 4 | 61 | HOI83285.1 flagellin [Campylobacterales bacterium] | diamond | 174 | 84.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacterales bacterium | ||||
| 30990332 | 30990332 | PRJNA168635_P_NODE_26374_length_168_cov_0.873950_g25958_i0 | PRJNA168635 | 26374 | 168 | 0.87395 | 1.468236 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 59.7 | 2.14e-9 | NR | TXH59333.1 | 2482794 | g25958 | i0 | 57.7 | 0.928571428571429 | 52 | 21 | 92.9 | 1 | 2 | 157 | 16 | 66 | TXH59333.1 MAG: RusA family crossover junction endodeoxyribonuclease [Desulfurellales bacterium] | diamond | 156 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 31147748 | 31147748 | PRJNA168635_P_NODE_31975_length_162_cov_0.920354_g31559_i0 | PRJNA168635 | 31975 | 162 | 0.920354 | 1.49097348 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 72.8 | 1.73e-13 | NR | TXH52971.1 | 2482794 | g31559 | i0 | 68 | 0.925925925925926 | 50 | 16 | 92.6 | 0 | 11 | 160 | 220 | 269 | TXH52971.1 MAG: hypothetical protein E6Q97_14190 [Desulfurellales bacterium] | diamond | 150 | 72.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 31323970 | 31323970 | PRJNA168635_P_NODE_7935_length_300_cov_2.418327_g7522_i0 | PRJNA168635 | 7935 | 300 | 2.418327 | 7.254981 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 71.2 | 4.6e-12 | NR | MFV0481888.1 | 2268179 | g7522 | i0 | 38.4 | 3.01 | 99 | 54 | 99 | 2 | 298 | 2 | 99 | 190 | MFV0481888.1 bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase [Campylobacteraceae bacterium] | diamond | 903 | 71.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacteraceae bacterium | |||
| 31401317 | 31401317 | PRJNA168635_P_NODE_23196_length_173_cov_2.693548_g22780_i0 | PRJNA168635 | 23196 | 173 | 2.693548 | 4.65983804 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 63.9 | 4.79e-10 | NR | TXH52223.1 | 2482794 | g22780 | i0 | 52.7 | 0.953757225433526 | 55 | 26 | 95.4 | 0 | 4 | 168 | 371 | 425 | TXH52223.1 MAG: phage portal protein [Desulfurellales bacterium] | diamond | 165 | 63.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 31653960 | 31653960 | PRJNA168635_P_NODE_25597_length_169_cov_0.866667_g25181_i0 | PRJNA168635 | 25597 | 169 | 0.866667 | 1.46466723 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 50.8 | 5.05e-6 | NR | TXH58565.1 | 2482794 | g25181 | i0 | 49.1 | 1.84615384615385 | 55 | 28 | 97.6 | 0 | 167 | 3 | 32 | 86 | TXH58565.1 MAG: hypothetical protein E6Q97_01930 [Desulfurellales bacterium] | diamond | 312 | 50.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 31653964 | 31653964 | PRJNA168635_P_NODE_34537_length_154_cov_3.828571_g34121_i0 | PRJNA168635 | 34537 | 154 | 3.828571 | 5.89599934 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 66.2 | 5.68e-11 | NR | TXH51573.1 | 2482794 | g34121 | i0 | 62.7 | 0.993506493506494 | 51 | 19 | 99.4 | 0 | 2 | 154 | 53 | 103 | TXH51573.1 MAG: hypothetical protein E6Q97_18130 [Desulfurellales bacterium] | diamond | 153 | 66.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 32540256 | 32540256 | PRJNA168635_P_NODE_12179_length_234_cov_0.945946_g11763_i0 | PRJNA168635 | 12179 | 234 | 0.945946 | 2.21351364 | Desulfurellales bacterium | 2482794 | Bacteria | Bacteria | 159 | 3.01e-44 | NR | TXH46698.1 | 2482794 | g11763 | i0 | 100 | 0.987179487179487 | 77 | 0 | 98.7 | 0 | 232 | 2 | 224 | 300 | TXH46698.1 MAG: hypothetical protein E6Q97_28965 [Desulfurellales bacterium] | diamond | 231 | 159 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Desulfurellia | Desulfurellales | Desulfurellales bacterium | ||||
| 32729125 | 32729125 | PRJNA168635_P_NODE_33720_length_157_cov_2.555556_g33304_i0 | PRJNA168635 | 33720 | 157 | 2.555556 | 4.01222292 | Sulfuricurvum sp. PD_MW2 | 2027917 | Bacteria | Bacteria | 103 | 2.87e-25 | NR | WP_294918127.1 | 2027917 | g33304 | i0 | 92.2 | 0.974522292993631 | 51 | 4 | 97.5 | 0 | 155 | 3 | 221 | 271 | WP_294918127.1 MBL fold metallo-hydrolase [Sulfuricurvum sp. PD_MW2] | diamond | 153 | 103 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfuricurvum | Sulfuricurvum sp. PD_MW2 | ||
| 32809768 | 32809768 | PRJNA168635_P_NODE_27980_length_166_cov_0.888889_g27564_i0 | PRJNA168635 | 27980 | 166 | 0.888889 | 1.47555574 | Sulfurospirillum | 57665 | Bacteria | Bacteria | 112 | 4.42e-29 | NR | WP_067175891.1 | 1581011 | g27564 | i0 | 94.5 | 1.98795180722892 | 55 | 3 | 99.4 | 0 | 165 | 1 | 165 | 219 | WP_067175891.1 DUF1847 domain-containing protein [Sulfurospirillum sp. UCH001] | diamond | 330 | 112 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum sp. UCH001 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;