RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA168635", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA168635 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26598760 26598760 PRJNA168635_P_NODE_20741_length_180_cov_1.450382_g20325_i0 PRJNA168635 20741 180 1.450382 2.6106876 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 54.7 6.73e-7   NR MBL7647258.1 2030809 g20325 i0 56.8 0.733333333333333 44 19 73.3 0 21 152 183 226 MBL7647258.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 132 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29694555 29694555 PRJNA168635_P_NODE_21270_length_178_cov_2.565891_g20854_i0 PRJNA168635 21270 178 2.565891 4.56728598 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 77.8 3.2e-15   NR MBN2311617.1 2030809 g20854 i0 60 1.85393258426966 55 22 92.7 0 166 2 138 192 MBN2311617.1 class I SAM-dependent methyltransferase [Candidatus Hydrogenedentota bacterium] diamond 330 77.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29947604 29947604 PRJNA168635_P_NODE_35491_length_151_cov_4.294118_g35075_i0 PRJNA168635 35491 151 4.294118 6.48411818 Candidatus Hydrogenedentes bacterium ADurb.Bin17 1852848 Bacteria Bacteria 43.1 0.00111   NR OQB31036.1 1852848 g35075 i0 58.3 0.71523178807947 36 15 71.5 0 10 117 28 63 OQB31036.1 MAG: hypothetical protein BWY07_02441 [Candidatus Hydrogenedentes bacterium ADurb.Bin170] diamond 108 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin170

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;