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contig_metadata

16 rows where bioproject = "PRJNA168635", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 16 ✖

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA168635 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1639257 1639257 PRJNA168635_P_NODE_21002_length_179_cov_1.600000_g20586_i0 PRJNA168635 21002 179 1.6 2.864 Cribraria violacea 1334538 Evosea other_Eukaryota 174 3.1e-39   NTclustered gi|501417113|gb|JX481322.1| 1334538 g20586 i0 84.615 81.2849162011173 182 20 99 7 1 178 678 501 Cribraria violacea voucher AMFD172 elongation factor 1A (EF1A) gene, partial cds blastn 14550 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Cribrariaceae Cribraria Cribraria violacea
11842939 11842939 PRJNA168635_P_NODE_13390_length_221_cov_15.808140_g12974_i0 PRJNA168635 13390 221 15.80814 34.9359894 Armaparvus browni 3387425 Evosea other_Eukaryota 97.1 8.92e-16   NTclustered gi|2871328632|gb|PQ778044.1| 3387425 g12974 i0 92.647 23.6289592760181 68 4 31 1 27 94 1349 1415 Armaparvus browni strain ZIN.2023.15 small subunit ribosomal RNA gene, partial sequence blastn 5222 97.1 1 Eukaryota Amoebozoa   Evosea       Armaparvus Armaparvus browni
13118378 13118378 PRJNA168635_P_NODE_291_length_1172_cov_15.185218_g209_i0 PRJNA168635 291 1172 15.185218 177.97075496 Squamamoeba japonica 1167875 Evosea other_Eukaryota 233 3.9799999999999995e-56   NTclustered gi|381423466|gb|JN638031.1| 1167875 g209 i0 82.143 19.7960750853242 280 43 28 7 331 605 1460 1183 Squamamoeba japonica strain CCAP 1593/1 clone 2222 18S ribosomal RNA gene, partial sequence blastn 23201 233 1 Eukaryota Amoebozoa   Evosea       Squamamoeba Squamamoeba japonica
16941715 16941715 PRJNA168635_P_NODE_2254_length_542_cov_18.720081_g1877_i0 PRJNA168635 2254 542 18.720081 101.46283902 Phalansterium solitarium 136499 Evosea other_Eukaryota 180 2.34e-40   NTclustered gi|300078500|gb|GU001162.1| 136499 g1877 i0 86.585 27.2785977859779 164 20 30 2 249 412 2967 2806 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14785 180 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
16941807 16941807 PRJNA168635_P_NODE_29074_length_165_cov_0.896552_g28658_i0 PRJNA168635 29074 165 0.896552 1.4793108 Cavenderia fasciculata 261658 Evosea other_Eukaryota 56.5 0.001   NTclustered gi|470246701|ref|XM_004366447.1| 261658 g28658 i0 96.97 0.36969696969697 33 1 20 0 92 124 1638 1606 Cavenderia fasciculata WD40 repeat-containing protein (utp15), partial mRNA blastn 61 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
18216165 18216165 PRJNA168635_P_NODE_20135_length_182_cov_1.300752_g19719_i0 PRJNA168635 20135 182 1.300752 2.36736864 Protostelium nocturnum 668368 Evosea other_Eukaryota 154 4.13e-33   NTclustered gi|260909295|gb|FJ766481.1| 668368 g19719 i0 90.083 57.5989010989011 121 8 65 4 2 120 348 230 Protostelium nocturnum strain LHI05M6a-1a culture-collection ATCC:PRA-194 18S ribosomal RNA gene, partial sequence blastn 10483 154 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium nocturnum
18216218 18216218 PRJNA168635_P_NODE_23815_length_172_cov_1.463415_g23399_i0 PRJNA168635 23815 172 1.463415 2.5170738 Physarum polycephalum 5791 Evosea other_Eukaryota 182 1.76e-41   NTclustered gi|3221|emb|V01159.1| 5791 g23399 i0 91.111 5.51162790697674 135 11 78 1 39 172 1977 2111 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 948 182 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
19490550 19490550 PRJNA168635_P_NODE_3076_length_475_cov_11.706573_g2682_i0 PRJNA168635 3076 475 11.706573 55.60622175 Squamamoeba japonica 1167875 Evosea other_Eukaryota 161 7.36e-35   NTclustered gi|381423465|gb|JN638030.1| 1167875 g2682 i0 80.543 21.8189473684211 221 33 45 5 261 472 1865 2084 Squamamoeba japonica strain CCAP 1593/1 clone 2218 18S ribosomal RNA gene, partial sequence blastn 10364 161 1 Eukaryota Amoebozoa   Evosea       Squamamoeba Squamamoeba japonica
23316499 23316499 PRJNA168635_P_NODE_16739_length_195_cov_4.780822_g16323_i0 PRJNA168635 16739 195 4.780822 9.3226029 uncultured Protosteliales 2590475 Evosea other_Eukaryota 261 2.57e-65   NTclustered gi|1691659334|gb|MN097008.1| 2590475 g16323 i0 90.909 80.4051282051282 198 13 100 3 1 195 171 366 Uncultured Protosteliales clone OTU148 small subunit ribosomal RNA gene, partial sequence blastn 15679 261 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida     uncultured Protosteliales
27692245 27692245 PRJNA168635_P_NODE_21364_length_178_cov_1.604651_g20948_i0 PRJNA168635 21364 178 1.604651 2.85627878 Eumycetozoa 142796 Evosea other_Eukaryota 50.1 4.13e-5   NR KAF2077285.1 133409 g20948 i0 44.9 2.6123595505618 49 26 80.9 1 169 26 900 948 KAF2077285.1 hypothetical protein CYY_001410 [Polysphondylium violaceum] diamond 465 50.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27706121 27706121 PRJNA168635_P_NODE_25104_length_169_cov_1.608333_g24688_i0 PRJNA168635 25104 169 1.608333 2.71808277 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 41.2 0.0497   NR KYQ91743.1 361077 g24688 i0 33.9 0.994082840236686 56 37 99.4 0 169 2 107 162 KYQ91743.1 myosin heavy chain kinase [Tieghemostelium lacteum] diamond 168 41.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28652969 28652969 PRJNA168635_P_NODE_12627_length_229_cov_1.238889_g12211_i0 PRJNA168635 12627 229 1.238889 2.83705581 Cavenderia fasciculata 261658 Evosea other_Eukaryota 48.9 1.82e-5   NR XP_004354089.1 261658 g12211 i0 33.9 0.77292576419214 59 39 77.3 0 216 40 10 68 XP_004354089.1 uncharacterized protein DFA_10181 [Cavenderia fasciculata] diamond 177 48.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31432706 31432706 PRJNA168635_P_NODE_11436_length_242_cov_3.316062_g11020_i0 PRJNA168635 11436 242 3.316062 8.02487004 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 42.4 0.0472   NR KAH3759767.1 1580589 g11020 i0 45.9 0.45867768595041303 37 20 45.9 0 238 128 128 164 KAH3759767.1 papain cysteine proteinase [Pelomyxa schiedti] diamond 111 42.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32002145 32002145 PRJNA168635_P_NODE_16498_length_197_cov_1.702703_g16082_i0 PRJNA168635 16498 197 1.702703 3.35432491 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 92.8 5.9400000000000005e-21   NR AER35085.1 361077 g16082 i0 68.9 3.71573604060914 61 19 92.9 0 13 195 171 231 AER35085.1 ribosomal protein S2 [Tieghemostelium lacteum] diamond 732 92.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32128904 32128904 PRJNA168635_P_NODE_22018_length_176_cov_2.417323_g21602_i0 PRJNA168635 22018 176 2.417323 4.25448848 Dictyostelium discoideum 44689 Evosea other_Eukaryota 80.9 2.58e-16   NR BAD89149.1 44689 g21602 i0 71.1 1.36363636363636 38 11 64.8 0 1 114 285 322 BAD89149.1 inhibitor of growth-1 homologue, DNG1 [Dictyostelium discoideum] diamond 240 80.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32886339 32886339 PRJNA168635_P_NODE_31120_length_163_cov_0.912281_g30704_i0 PRJNA168635 31120 163 0.912281 1.48701803 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 59.3 1.8e-8   NR PRP88592.1 1890364 g30704 i0 52.8 1.87730061349693 53 25 97.5 0 162 4 244 296 PRP88592.1 transcription elongation regulator 1-like [Planoprotostelium fungivorum] diamond 306 59.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;