contig_metadata
40 rows where bioproject = "PRJNA1264536" and tax_phylum = "Pseudomonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 363903 | 363903 | PRJNA1264536_P_NODE_5281_length_244_cov_0.912281_g5207_i0 | PRJNA1264536 | 5281 | 244 | 0.912281 | 2.22596564 | Aeromonas veronii | 654 | Bacteria | Bacteria | 141 | 4.57e-29 | NTclustered | gi|1285282383|gb|CP024930.1| | 654 | g5207 | i0 | 100 | 26.9754098360656 | 76 | 0 | 31 | 0 | 169 | 244 | 1588010 | 1587935 | Aeromonas veronii strain X11 chromosome, complete genome | blastn | 6582 | 141 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 1054101 | 1054101 | PRJNA1264536_P_NODE_3481_length_296_cov_1.103139_g3407_i0 | PRJNA1264536 | 3481 | 296 | 1.103139 | 3.26529144 | Vibrio | 662 | Bacteria | Bacteria | 547 | 2.8799999999999986e-151 | NTclustered | gi|1858855023|gb|CP053808.1| | 666 | g3407 | i0 | 100 | 100 | 296 | 0 | 100 | 0 | 1 | 296 | 2328533 | 2328828 | Vibrio cholerae strain SP7G chromosome 1, complete sequence | blastn | 29600 | 547 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 1638726 | 1638726 | PRJNA1264536_P_NODE_2802_length_334_cov_1.191571_g2728_i0 | PRJNA1264536 | 2802 | 334 | 1.191571 | 3.97984714 | Salmonella sp. s51228 | 3159652 | Bacteria | Bacteria | 152 | 1.1599999999999999e-43 | NR | WP_411022868.1 | 3159652 | g2728 | i0 | 67.6 | 13.6437125748503 | 108 | 35 | 97 | 0 | 334 | 11 | 53 | 160 | WP_411022868.1 GTP-binding protein [Salmonella sp. s51228] | diamond | 4557 | 152 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella sp. s51228 | ||
| 1638777 | 1638777 | PRJNA1264536_P_NODE_5262_length_244_cov_0.912281_g5188_i0 | PRJNA1264536 | 5262 | 244 | 0.912281 | 2.22596564 | Aquabacterium sp. | 1872578 | Bacteria | Bacteria | 159 | 1.7599999999999998e-46 | NR | HET6788839.1 | 1872578 | g5188 | i0 | 92.5 | 5.9016393442623 | 80 | 6 | 98.4 | 0 | 242 | 3 | 48 | 127 | HET6788839.1 D-alanyl-D-alanine carboxypeptidase family protein [Aquabacterium sp.] | diamond | 1440 | 159 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium sp. | |||
| 2329325 | 2329325 | PRJNA1264536_P_NODE_3782_length_280_cov_1.304348_g3708_i0 | PRJNA1264536 | 3782 | 280 | 1.304348 | 3.6521744 | Proteus | 583 | Bacteria | Bacteria | 512 | 9.85e-141 | NTclustered | gi|1845856815|gb|CP053042.1| | 626774 | g3708 | i0 | 99.643 | 97.1678571428571 | 280 | 1 | 100 | 0 | 1 | 280 | 3848966 | 3849245 | Proteus terrae subsp. cibarius strain HNCF44W chromosome, complete genome | blastn | 27207 | 512 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Proteus | Proteus terrae | ||
| 2914620 | 2914620 | PRJNA1264536_P_NODE_4463_length_252_cov_0.871508_g4389_i0 | PRJNA1264536 | 4463 | 252 | 0.871508 | 2.19620016 | Aeromonas caviae | 648 | Bacteria | Bacteria | 460 | 3.2e-125 | NTclustered | gi|1403532284|emb|LS483441.1| | 648 | g4389 | i0 | 99.605 | 910.035714285714 | 253 | 0 | 100 | 1 | 1 | 252 | 810909 | 810657 | Aeromonas caviae strain NCTC12244 genome assembly, chromosome: 1 | blastn | 229329 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas caviae | ||
| 3604500 | 3604500 | PRJNA1264536_P_NODE_5303_length_244_cov_0.912281_g5229_i0 | PRJNA1264536 | 5303 | 244 | 0.912281 | 2.22596564 | Vibrio | 662 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2624789688|gb|CP134061.1| | 666 | g5229 | i0 | 100 | 101 | 244 | 0 | 100 | 0 | 1 | 244 | 612373 | 612616 | Vibrio cholerae strain CMUL 009 chromosome 2, complete sequence | blastn | 24644 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 6156786 | 6156786 | PRJNA1264536_P_NODE_4545_length_251_cov_0.876404_g4471_i0 | PRJNA1264536 | 4545 | 251 | 0.876404 | 2.19977404 | Vibrio | 662 | Bacteria | Bacteria | 462 | 8.869999999999999e-126 | NTclustered | gi|2624789688|gb|CP134061.1| | 666 | g4471 | i0 | 100 | 99.601593625498 | 250 | 0 | 99 | 0 | 2 | 251 | 994070 | 993821 | Vibrio cholerae strain CMUL 009 chromosome 2, complete sequence | blastn | 25000 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 7431978 | 7431978 | PRJNA1264536_P_NODE_2766_length_336_cov_3.121673_g2692_i0 | PRJNA1264536 | 2766 | 336 | 3.121673 | 10.48882128 | Vibrio | 662 | Bacteria | Bacteria | 619 | 6.93e-173 | NTclustered | gi|1858855023|gb|CP053808.1| | 666 | g2692 | i0 | 100 | 99.7023809523809 | 335 | 0 | 99 | 0 | 1 | 335 | 2801081 | 2801415 | Vibrio cholerae strain SP7G chromosome 1, complete sequence | blastn | 33500 | 619 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 7431982 | 7431982 | PRJNA1264536_P_NODE_5326_length_244_cov_0.912281_g5252_i0 | PRJNA1264536 | 5326 | 244 | 0.912281 | 2.22596564 | root | 1 | Root_unresolved | Root_unresolved | 451 | 1.86e-122 | NTclustered | gi|2562510300|gb|CP132180.1| | 666 | g5252 | i0 | 100 | 101 | 244 | 0 | 100 | 0 | 1 | 244 | 728886 | 729129 | Vibrio cholerae strain DRC193A chromosome 1, complete sequence | blastn | 24644 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 8017288 | 8017288 | PRJNA1264536_P_NODE_4707_length_250_cov_0.881356_g4633_i0 | PRJNA1264536 | 4707 | 250 | 0.881356 | 2.20339 | Enhydrobacter sp. | 1894999 | Bacteria | Bacteria | 318 | 2.02e-82 | NTclustered | gi|2515462020|gb|CP126889.1| | 1894999 | g4633 | i0 | 89.6 | 1 | 250 | 26 | 100 | 0 | 1 | 250 | 3611747 | 3611498 | MAG: Enhydrobacter sp. isolate bin_2004 chromosome, complete genome | blastn | 250 | 318 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Enhydrobacter | Enhydrobacter sp. | |||
| 8706812 | 8706812 | PRJNA1264536_P_NODE_4927_length_248_cov_0.891429_g4853_i0 | PRJNA1264536 | 4927 | 248 | 0.891429 | 2.21074392 | Hyphomicrobiales | 356 | Bacteria | Bacteria | 254 | 5.73e-63 | NTclustered | gi|2741304183|gb|CP157794.1| | 2766526 | g4853 | i0 | 85.656 | 79.0483870967742 | 244 | 31 | 98 | 4 | 1 | 242 | 59616 | 59375 | MAG: Salinarimonas sp. isolate ALCB114379_MAG1 chromosome, complete genome | blastn | 19604 | 254 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Salinarimonadaceae | Salinarimonas | Salinarimonas sp. | ||
| 8706813 | 8706813 | PRJNA1264536_P_NODE_5187_length_245_cov_0.906977_g5113_i0 | PRJNA1264536 | 5187 | 245 | 0.906977 | 2.22209365 | Vibrio | 662 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2562510300|gb|CP132180.1| | 666 | g5113 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 2534135 | 2534379 | Vibrio cholerae strain DRC193A chromosome 1, complete sequence | blastn | 24500 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 9982124 | 9982124 | PRJNA1264536_P_NODE_2648_length_345_cov_2.003676_g2574_i0 | PRJNA1264536 | 2648 | 345 | 2.003676 | 6.9126822 | Komagataeibacter | 1434011 | Bacteria | Bacteria | 638 | 1.97e-178 | NTclustered | gi|2755830701|gb|CP137152.1| | 1053551 | g2574 | i0 | 100 | 80.9797101449275 | 345 | 0 | 100 | 0 | 1 | 345 | 991113 | 990769 | Komagataeibacter sucrofermentans strain JML 2321 chromosome, complete genome | blastn | 27938 | 638 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Komagataeibacter | Komagataeibacter sucrofermentans | ||
| 9982126 | 9982126 | PRJNA1264536_P_NODE_4048_length_267_cov_1.474227_g3974_i0 | PRJNA1264536 | 4048 | 267 | 1.474227 | 3.93618609 | Bradyrhizobium | 374 | Bacteria | Bacteria | 202 | 2.29e-47 | NTclustered | gi|2498909638|gb|CP094525.1| | 2866199 | g3974 | i0 | 82.353 | 81.4794007490637 | 238 | 36 | 88 | 6 | 1 | 235 | 7680989 | 7680755 | Bradyrhizobium sp. ISRA463 chromosome, complete genome | blastn | 21755 | 202 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. ISRA463 | ||
| 9982129 | 9982129 | PRJNA1264536_P_NODE_5388_length_243_cov_0.917647_g5314_i0 | PRJNA1264536 | 5388 | 243 | 0.917647 | 2.22988221 | Aeromonas | 642 | Bacteria | Bacteria | 287 | 5.52e-73 | NTclustered | gi|1987851782|gb|CP070210.1| | 654 | g5314 | i0 | 100 | 63.7736625514403 | 155 | 0 | 64 | 0 | 89 | 243 | 3935088 | 3934934 | Aeromonas veronii strain Colony108 chromosome | blastn | 15497 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 10568026 | 10568026 | PRJNA1264536_P_NODE_4669_length_250_cov_0.881356_g4595_i0 | PRJNA1264536 | 4669 | 250 | 0.881356 | 2.20339 | Polynucleobacter sp. HIN8 | 3047867 | Bacteria | Bacteria | 418 | 1.9399999999999998e-112 | NTclustered | gi|2513064079|dbj|AP028139.1| | 3047867 | g4595 | i0 | 96.8 | 2 | 250 | 8 | 100 | 0 | 1 | 250 | 252975 | 253224 | Polynucleobacter sp. HIN8 DNA, complete genome | blastn | 500 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter sp. HIN8 | ||
| 11842574 | 11842574 | PRJNA1264536_P_NODE_4590_length_251_cov_0.876404_g4516_i0 | PRJNA1264536 | 4590 | 251 | 0.876404 | 2.19977404 | Comamonas kerstersii | 225992 | Bacteria | Bacteria | 278 | 3.4500000000000005e-70 | NTclustered | gi|1162911661|gb|CP020121.1| | 225992 | g4516 | i0 | 89.498 | 34.3545816733068 | 219 | 23 | 87 | 0 | 33 | 251 | 1501830 | 1501612 | Comamonas kerstersii strain 8943, complete genome | blastn | 8623 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas kerstersii | ||
| 11842582 | 11842582 | PRJNA1264536_P_NODE_4990_length_247_cov_0.896552_g4916_i0 | PRJNA1264536 | 4990 | 247 | 0.896552 | 2.21448344 | Aeromonas sp. FDAARGOS 1417 | 2778066 | Bacteria | Bacteria | 375 | 1.1699999999999999e-99 | NTclustered | gi|2058370386|gb|CP077221.1| | 2778066 | g4916 | i0 | 98.585 | 85.8137651821862 | 212 | 3 | 86 | 0 | 1 | 212 | 4054087 | 4054298 | Aeromonas sp. FDAARGOS 1417 chromosome, complete genome | blastn | 21196 | 375 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas sp. FDAARGOS 1417 | ||
| 11842590 | 11842590 | PRJNA1264536_P_NODE_5470_length_242_cov_0.923077_g5396_i0 | PRJNA1264536 | 5470 | 242 | 0.923077 | 2.23384634 | Acinetobacter sp. YH12068_T | 2929515 | Bacteria | Bacteria | 436 | 5.1499999999999985e-118 | NTclustered | gi|2283799445|gb|CP094555.1| | 2929515 | g5396 | i0 | 99.174 | 6.01239669421488 | 242 | 2 | 100 | 0 | 1 | 242 | 2783122 | 2782881 | Acinetobacter sp. YH12068_T chromosome, complete genome | blastn | 1455 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. YH12068_T | ||
| 11842592 | 11842592 | PRJNA1264536_P_NODE_5510_length_242_cov_0.923077_g5436_i0 | PRJNA1264536 | 5510 | 242 | 0.923077 | 2.23384634 | Acinetobacter piscicola | 2006115 | Bacteria | Bacteria | 436 | 5.1499999999999985e-118 | NTclustered | gi|1928012375|gb|CP048659.1| | 2006115 | g5436 | i0 | 99.174 | 25.8388429752066 | 242 | 2 | 100 | 0 | 1 | 242 | 2670928 | 2671169 | Acinetobacter piscicola strain YH12207_T chromosome, complete genome | blastn | 6253 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter piscicola | ||
| 13117742 | 13117742 | PRJNA1264536_P_NODE_4411_length_253_cov_0.866667_g4337_i0 | PRJNA1264536 | 4411 | 253 | 0.866667 | 2.19266751 | Comamonas testosteroni | 285 | Bacteria | Bacteria | 407 | 4.2500000000000005e-109 | NTclustered | gi|1752751013|gb|CP044131.1| | 285 | g4337 | i0 | 95.652 | 1 | 253 | 11 | 100 | 0 | 1 | 253 | 2325829 | 2326081 | Comamonas testosteroni strain NFYY023 chromosome, complete genome | blastn | 253 | 407 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 13807455 | 13807455 | PRJNA1264536_P_NODE_2291_length_373_cov_2.310000_g2217_i0 | PRJNA1264536 | 2291 | 373 | 2.31 | 8.6163 | Vibrio | 662 | Bacteria | Bacteria | 689 | 0 | NTclustered | gi|1858855023|gb|CP053808.1| | 666 | g2217 | i0 | 100 | 100 | 373 | 0 | 100 | 0 | 1 | 373 | 501871 | 502243 | Vibrio cholerae strain SP7G chromosome 1, complete sequence | blastn | 37300 | 689 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 13807458 | 13807458 | PRJNA1264536_P_NODE_4391_length_253_cov_0.866667_g4317_i0 | PRJNA1264536 | 4391 | 253 | 0.866667 | 2.19266751 | root | 1 | Root_unresolved | Root_unresolved | 468 | 1.92e-127 | NTclustered | gi|2562510300|gb|CP132180.1| | 666 | g4317 | i0 | 100 | 100 | 253 | 0 | 100 | 0 | 1 | 253 | 1299263 | 1299515 | Vibrio cholerae strain DRC193A chromosome 1, complete sequence | blastn | 25300 | 468 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 14393088 | 14393088 | PRJNA1264536_P_NODE_4472_length_252_cov_0.871508_g4398_i0 | PRJNA1264536 | 4472 | 252 | 0.871508 | 2.19620016 | Aquipseudomonas alcaligenes | 43263 | Bacteria | Bacteria | 124 | 4.77e-24 | NTclustered | gi|1958576591|dbj|AP024354.1| | 43263 | g4398 | i0 | 100 | 71.0873015873016 | 67 | 0 | 27 | 0 | 186 | 252 | 2791262 | 2791328 | Pseudomonas alcaligenes KAM426 DNA, complete genome | blastn | 17914 | 124 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas alcaligenes | ||
| 15081636 | 15081636 | PRJNA1264536_P_NODE_3452_length_297_cov_5.406250_g3378_i0 | PRJNA1264536 | 3452 | 297 | 5.40625 | 16.0565625 | Vibrio | 662 | Bacteria | Bacteria | 549 | 8.029999999999997e-152 | NTclustered | gi|2624789688|gb|CP134061.1| | 666 | g3378 | i0 | 100 | 100 | 297 | 0 | 100 | 0 | 1 | 297 | 300181 | 299885 | Vibrio cholerae strain CMUL 009 chromosome 2, complete sequence | blastn | 29700 | 549 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 15081638 | 15081638 | PRJNA1264536_P_NODE_3632_length_288_cov_2.172093_g3558_i0 | PRJNA1264536 | 3632 | 288 | 2.172093 | 6.25562784 | root | 1 | Root_unresolved | Root_unresolved | 531 | 2.81e-146 | NTclustered | gi|2562510300|gb|CP132180.1| | 666 | g3558 | i0 | 100 | 99.6527777777778 | 287 | 0 | 99 | 0 | 1 | 287 | 2340961 | 2341247 | Vibrio cholerae strain DRC193A chromosome 1, complete sequence | blastn | 28700 | 531 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 15081641 | 15081641 | PRJNA1264536_P_NODE_4312_length_253_cov_1.300000_g4238_i0 | PRJNA1264536 | 4312 | 253 | 1.3 | 3.289 | root | 1 | Root_unresolved | Root_unresolved | 466 | 6.9199999999999996e-127 | NTclustered | gi|1236048980|gb|MF716682.1| | 644 | g4238 | i0 | 100 | 117.533596837945 | 252 | 0 | 99 | 0 | 2 | 253 | 640 | 389 | Aeromonas hydrophila strain DC3N-1 16S ribosomal RNA gene, partial sequence | blastn | 29736 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas hydrophila | ||
| 16356455 | 16356455 | PRJNA1264536_P_NODE_4993_length_247_cov_0.896552_g4919_i0 | PRJNA1264536 | 4993 | 247 | 0.896552 | 2.21448344 | Proteus | 583 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|1845856815|gb|CP053042.1| | 626774 | g4919 | i0 | 99.595 | 40.6558704453441 | 247 | 1 | 100 | 0 | 1 | 247 | 2498445 | 2498691 | Proteus terrae subsp. cibarius strain HNCF44W chromosome, complete genome | blastn | 10042 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Proteus | Proteus terrae | ||
| 17631701 | 17631701 | PRJNA1264536_P_NODE_4174_length_260_cov_1.663102_g4100_i0 | PRJNA1264536 | 4174 | 260 | 1.663102 | 4.3240652 | Vibrio | 662 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|2562510300|gb|CP132180.1| | 666 | g4100 | i0 | 100 | 100 | 260 | 0 | 100 | 0 | 1 | 260 | 885437 | 885178 | Vibrio cholerae strain DRC193A chromosome 1, complete sequence | blastn | 26000 | 481 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 18215667 | 18215667 | PRJNA1264536_P_NODE_5375_length_243_cov_0.917647_g5301_i0 | PRJNA1264536 | 5375 | 243 | 0.917647 | 2.22988221 | Pulveribacter suum | 2116657 | Bacteria | Bacteria | 217 | 7.34e-52 | NTclustered | gi|1368667805|gb|CP027792.1| | 2116657 | g5301 | i0 | 82.716 | 4.96707818930041 | 243 | 42 | 100 | 0 | 1 | 243 | 2118921 | 2119163 | Pulveribacter suum strain SC2-7 chromosome, complete genome | blastn | 1207 | 217 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Pulveribacter | Pulveribacter suum | ||
| 20765493 | 20765493 | PRJNA1264536_P_NODE_4877_length_248_cov_0.891429_g4803_i0 | PRJNA1264536 | 4877 | 248 | 0.891429 | 2.21074392 | Rhodospirillaceae bacterium | 1898112 | Bacteria | Bacteria | 126 | 8.99e-33 | NR | MEQ9448422.1 | 1898112 | g4803 | i0 | 77.9 | 2.86693548387097 | 77 | 17 | 93.1 | 0 | 231 | 1 | 144 | 220 | MEQ9448422.1 acyl-CoA dehydrogenase family protein [Rhodospirillaceae bacterium] | diamond | 711 | 126 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Rhodospirillaceae | Rhodospirillaceae bacterium | |||
| 22730854 | 22730854 | PRJNA1264536_P_NODE_5158_length_245_cov_0.906977_g5084_i0 | PRJNA1264536 | 5158 | 245 | 0.906977 | 2.22209365 | Aeromonas | 642 | Bacteria | Bacteria | 111 | 3.6e-20 | NTclustered | gi|2489122631|gb|CP121837.1| | 654 | g5084 | i0 | 100 | 8.06938775510204 | 60 | 0 | 24 | 0 | 1 | 60 | 2581922 | 2581981 | Aeromonas veronii strain ANYA 18263 chromosome, complete genome | blastn | 1977 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 24590215 | 24590215 | PRJNA1264536_P_NODE_5440_length_243_cov_0.905882_g5366_i0 | PRJNA1264536 | 5440 | 243 | 0.905882 | 2.20129326 | Aeromonas caviae | 648 | Bacteria | Bacteria | 438 | 1.4399999999999996e-118 | NTclustered | gi|1706957921|gb|CP039832.1| | 648 | g5366 | i0 | 99.177 | 99.4526748971193 | 243 | 2 | 100 | 0 | 1 | 243 | 4263240 | 4262998 | Aeromonas caviae strain WCW1-2 chromosome, complete genome | blastn | 24167 | 438 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas caviae | ||
| 25280121 | 25280121 | PRJNA1264536_P_NODE_1800_length_425_cov_1.289773_g1726_i0 | PRJNA1264536 | 1800 | 425 | 1.289773 | 5.48153525 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|2890464394|gb|CP177216.1| | 562 | g1726 | i0 | 99.528 | 928.597647058824 | 424 | 2 | 99 | 0 | 1 | 424 | 3426417 | 3425994 | Escherichia coli strain ECDA0423 chromosome, complete genome | blastn | 394654 | 778 | 0.993573264781491 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27200104 | 27200104 | PRJNA1264536_P_NODE_5502_length_242_cov_0.923077_g5428_i0 | PRJNA1264536 | 5502 | 242 | 0.923077 | 2.23384634 | Roseiarcus sp. | 1969460 | Bacteria | Bacteria | 55.5 | 1.22e-6 | NR | HTR12120.1 | 1969460 | g5428 | i0 | 71.8 | 0.483471074380165 | 39 | 11 | 48.3 | 0 | 125 | 241 | 260 | 298 | HTR12120.1 PAS domain S-box protein [Roseiarcus sp.] | diamond | 117 | 55.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Roseiarcaceae | Roseiarcus | Roseiarcus sp. | ||
| 28684713 | 28684713 | PRJNA1264536_P_NODE_5547_length_242_cov_0.923077_g5473_i0 | PRJNA1264536 | 5547 | 242 | 0.923077 | 2.23384634 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 122 | 5.86e-34 | NR | MDE3016639.1 | 1977087 | g5473 | i0 | 68.4 | 0.979338842975207 | 79 | 25 | 97.9 | 0 | 3 | 239 | 32 | 110 | MDE3016639.1 hypothetical protein [Pseudomonadota bacterium] | diamond | 237 | 122 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 28860087 | 28860087 | PRJNA1264536_P_NODE_4788_length_249_cov_0.886364_g4714_i0 | PRJNA1264536 | 4788 | 249 | 0.886364 | 2.20704636 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 115 | 1.42e-30 | NR | MEA3070562.1 | 1913988 | g4714 | i0 | 76.9 | 9.39759036144578 | 78 | 18 | 94 | 0 | 6 | 239 | 20 | 97 | MEA3070562.1 hypothetical protein [Alphaproteobacteria bacterium] | diamond | 2340 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 31622450 | 31622450 | PRJNA1264536_P_NODE_5516_length_242_cov_0.923077_g5442_i0 | PRJNA1264536 | 5516 | 242 | 0.923077 | 2.23384634 | Escherichia coli | 562 | Bacteria | Bacteria | 87.8 | 4.17e-18 | NR | WP_286497621.1 | 562 | g5442 | i0 | 73.2 | 0.694214876033058 | 56 | 15 | 69.4 | 0 | 168 | 1 | 78 | 133 | WP_286497621.1 DDE-type integrase/transposase/recombinase [Escherichia coli] | diamond | 168 | 87.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32350378 | 32350378 | PRJNA1264536_P_NODE_5199_length_245_cov_0.906977_g5125_i0 | PRJNA1264536 | 5199 | 245 | 0.906977 | 2.22209365 | Betaproteobacteria bacterium | 1891241 | Bacteria | Bacteria | 159 | 7.29e-48 | NR | MBU6304130.1 | 1891241 | g5125 | i0 | 93.8 | 0.991836734693878 | 81 | 5 | 99.2 | 0 | 245 | 3 | 18 | 98 | MBU6304130.1 VOC family protein [Betaproteobacteria bacterium] | diamond | 243 | 159 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Betaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;