RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1264536", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1264536 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1638767 1638767 PRJNA1264536_P_NODE_4482_length_252_cov_0.871508_g4408_i0 PRJNA1264536 4482 252 0.871508 2.19620016 brine shrimp yue-like virus 3 2900455 Viruses Viruses 453 5.36e-123   NTclustered gi|2209094277|gb|OL472813.1| 2900455 g4408 i0 99.203 0.996031746031746 251 2 99 0 1 251 120 370 MAG: Brine shrimp yue-like virus 3 isolate 01/QH/92-02 segment 2 hypothetical protein gene, complete cds blastn 251 453 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
13117730 13117730 PRJNA1264536_P_NODE_3911_length_274_cov_1.034826_g3837_i0 PRJNA1264536 3911 274 1.034826 2.83542324 brine shrimp yue-like virus 3 2900455 Viruses Viruses 496 9.67e-136   NTclustered gi|2209095234|gb|OL472819.1| 2900455 g3837 i0 99.27 10.9233576642336 274 2 100 0 1 274 193 466 MAG: Brine shrimp yue-like virus 3 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 2993 496 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3
28463654 28463654 PRJNA1264536_P_NODE_726_length_683_cov_1.106557_g657_i0 PRJNA1264536 726 683 1.106557 7.55778431 brine shrimp arlivirus 5 2900380 Viruses Viruses 154 4.53e-40   NR UNI74091.1 2900380 g657 i0 43.8 0.98389458272328 224 126 98.4 0 682 11 61 284 UNI74091.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 672 154 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis
31591071 31591071 PRJNA1264536_P_NODE_1076_length_561_cov_1.526639_g1003_i0 PRJNA1264536 1076 561 1.526639 8.56444479 brine shrimp arlivirus 5 2900380 Viruses Viruses 303 2.1599999999999997e-99   NR UNI74090.1 2900380 g1003 i0 79.6 0.994652406417112 186 38 99.5 0 3 560 209 394 UNI74090.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 558 303 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;