contig_metadata
21 rows where bioproject = "PRJNA1264536" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2329326 | 2329326 | PRJNA1264536_P_NODE_4702_length_250_cov_0.881356_g4628_i0 | PRJNA1264536 | 4702 | 250 | 0.881356 | 2.20339 | Faecalibacterium | 216851 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2094528058|gb|CP065382.1| | 853 | g4628 | i0 | 100 | 39.052 | 250 | 0 | 100 | 0 | 1 | 250 | 1955882 | 1956131 | Faecalibacterium prausnitzii strain Fp944 chromosome, complete genome | blastn | 9763 | 462 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Faecalibacterium | Faecalibacterium prausnitzii | ||
| 2914632 | 2914632 | PRJNA1264536_P_NODE_5163_length_245_cov_0.906977_g5089_i0 | PRJNA1264536 | 5163 | 245 | 0.906977 | 2.22209365 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 140 | 4.91e-39 | NR | MBP3463663.1 | 2044939 | g5089 | i0 | 82.7 | 0.991836734693878 | 81 | 14 | 99.2 | 0 | 1 | 243 | 16 | 96 | MBP3463663.1 sporulation transcription factor Spo0A [Clostridia bacterium] | diamond | 243 | 140 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 4191037 | 4191037 | PRJNA1264536_P_NODE_4884_length_248_cov_0.891429_g4810_i0 | PRJNA1264536 | 4884 | 248 | 0.891429 | 2.21074392 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2318943546|gb|CP107201.1| | 2485925 | g4810 | i0 | 100 | 1.98790322580645 | 248 | 0 | 100 | 0 | 1 | 248 | 302940 | 302693 | MAG: Oscillospiraceae bacterium isolate KR001_HAM_0045 chromosome, complete genome | blastn | 493 | 459 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 5467275 | 5467275 | PRJNA1264536_P_NODE_5065_length_246_cov_0.901734_g4991_i0 | PRJNA1264536 | 5065 | 246 | 0.901734 | 2.21826564 | Oscillospiraceae | 216572 | Bacteria | Bacteria | 164 | 6.3699999999999985e-47 | NR | WP_291223707.1 | 2049027 | g4991 | i0 | 100 | 2.96341463414634 | 81 | 0 | 98.8 | 0 | 245 | 3 | 255 | 335 | WP_291223707.1 ribosome biogenesis GTPase Der [Gemmiger sp.] | diamond | 729 | 164 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Gemmiger | Gemmiger sp. | |||
| 8706810 | 8706810 | PRJNA1264536_P_NODE_3747_length_282_cov_0.856459_g3673_i0 | PRJNA1264536 | 3747 | 282 | 0.856459 | 2.41521438 | Faecalibacterium | 216851 | Bacteria | Bacteria | 394 | 3.75e-105 | NTclustered | gi|2094528058|gb|CP065382.1| | 853 | g3673 | i0 | 100 | 245.560283687943 | 213 | 0 | 79 | 0 | 70 | 282 | 355362 | 355150 | Faecalibacterium prausnitzii strain Fp944 chromosome, complete genome | blastn | 69248 | 394 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Faecalibacterium | Faecalibacterium prausnitzii | ||
| 9292070 | 9292070 | PRJNA1264536_P_NODE_4608_length_251_cov_0.876404_g4534_i0 | PRJNA1264536 | 4608 | 251 | 0.876404 | 2.19977404 | Clostridium manihotivorum | 2320868 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1554469089|gb|CP025746.1| | 2320868 | g4534 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 24 | 51 | 1835404 | 1835431 | Clostridium manihotivorum strain CT4 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium manihotivorum | ||
| 10568040 | 10568040 | PRJNA1264536_P_NODE_5429_length_243_cov_0.917647_g5355_i0 | PRJNA1264536 | 5429 | 243 | 0.917647 | 2.22988221 | Faecalitalea cylindroides | 39483 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|295098739|emb|FP929041.1| | 717960 | g5355 | i0 | 99.588 | 13.6913580246914 | 243 | 1 | 100 | 0 | 1 | 243 | 917485 | 917727 | Eubacterium cylindroides T2-87 draft genome | blastn | 3327 | 444 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Faecalitalea | Faecalitalea cylindroides | ||
| 18215663 | 18215663 | PRJNA1264536_P_NODE_5235_length_245_cov_0.860465_g5161_i0 | PRJNA1264536 | 5235 | 245 | 0.860465 | 2.10813925 | Bacillus sp. FJAT-42376 | 2014076 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1519589463|gb|CP033906.1| | 2014076 | g5161 | i0 | 100 | 0.114285714285714 | 28 | 0 | 11 | 0 | 34 | 61 | 1125341 | 1125368 | Bacillus sp. FJAT-42376 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. FJAT-42376 | ||
| 22040595 | 22040595 | PRJNA1264536_P_NODE_5378_length_243_cov_0.917647_g5304_i0 | PRJNA1264536 | 5378 | 243 | 0.917647 | 2.22988221 | Blautia wexlerae | 418240 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|2921375364|gb|CP136550.1| | 1121115 | g5304 | i0 | 99.588 | 5.86008230452675 | 243 | 1 | 100 | 0 | 1 | 243 | 3974127 | 3974369 | Blautia wexlerae DSM 19850 chromosome, complete genome | blastn | 1424 | 444 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Blautia | Blautia wexlerae | ||
| 26662071 | 26662071 | PRJNA1264536_P_NODE_3861_length_276_cov_1.497537_g3787_i0 | PRJNA1264536 | 3861 | 276 | 1.497537 | 4.13320212 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 109 | 8.920000000000001e-27 | NR | MDJ8942383.1 | 1502 | g3787 | i0 | 72.2 | 1.91304347826087 | 90 | 25 | 97.8 | 0 | 276 | 7 | 26 | 115 | MDJ8942383.1 hypothetical protein [Clostridium perfringens] | diamond | 528 | 109 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 26820908 | 26820908 | PRJNA1264536_P_NODE_5001_length_247_cov_0.896552_g4927_i0 | PRJNA1264536 | 5001 | 247 | 0.896552 | 2.21448344 | Ruminiclostridium sp. | 2053608 | Bacteria | Bacteria | 46.2 | 0.0021 | NR | MBQ8613087.1 | 2053608 | g4927 | i0 | 74.1 | 0.631578947368421 | 27 | 7 | 32.8 | 0 | 167 | 247 | 1 | 27 | MBQ8613087.1 sugar phosphate isomerase/epimerase [Ruminiclostridium sp.] | diamond | 156 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminiclostridium | Ruminiclostridium sp. | ||
| 27421780 | 27421780 | PRJNA1264536_P_NODE_3303_length_306_cov_1.193133_g3229_i0 | PRJNA1264536 | 3303 | 306 | 1.193133 | 3.65098698 | Veillonella sp. | 1926307 | Bacteria | Bacteria | 155 | 7.989999999999998e-47 | NR | WP_366512514.1 | 1926307 | g3229 | i0 | 73 | 0.980392156862745 | 100 | 27 | 98 | 0 | 3 | 302 | 6 | 105 | WP_366512514.1 hypothetical protein [Veillonella sp.] | diamond | 300 | 155 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella sp. | ||
| 27706109 | 27706109 | PRJNA1264536_P_NODE_5104_length_246_cov_0.901734_g5030_i0 | PRJNA1264536 | 5104 | 246 | 0.901734 | 2.21826564 | Roseburia inulinivorans | 360807 | Bacteria | Bacteria | 165 | 7.84e-51 | NR | MFR8426660.1 | 360807 | g5030 | i0 | 100 | 1.97560975609756 | 81 | 0 | 98.8 | 0 | 244 | 2 | 17 | 97 | MFR8426660.1 hypothetical protein [Roseburia inulinivorans] | diamond | 486 | 165 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Roseburia | Roseburia inulinivorans | ||
| 27769110 | 27769110 | PRJNA1264536_P_NODE_5384_length_243_cov_0.917647_g5310_i0 | PRJNA1264536 | 5384 | 243 | 0.917647 | 2.22988221 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 149 | 1.55e-39 | NR | MBQ9850949.1 | 2044939 | g5310 | i0 | 92.5 | 0.987654320987654 | 80 | 6 | 98.8 | 0 | 242 | 3 | 411 | 490 | MBQ9850949.1 ABC transporter permease [Clostridia bacterium] | diamond | 240 | 149 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28084494 | 28084494 | PRJNA1264536_P_NODE_5365_length_243_cov_0.917647_g5291_i0 | PRJNA1264536 | 5365 | 243 | 0.917647 | 2.22988221 | Enterococcus dispar | 44009 | Bacteria | Bacteria | 74.3 | 5.03e-15 | NR | WP_281738482.1 | 44009 | g5291 | i0 | 53.4 | 0.901234567901235 | 73 | 33 | 90.1 | 1 | 233 | 15 | 1 | 72 | WP_281738482.1 hypothetical protein [Enterococcus dispar] | diamond | 219 | 74.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus dispar | ||
| 28210723 | 28210723 | PRJNA1264536_P_NODE_4406_length_253_cov_0.866667_g4332_i0 | PRJNA1264536 | 4406 | 253 | 0.866667 | 2.19266751 | Intestinibacter bartlettii | 261299 | Bacteria | Bacteria | 110 | 3.5600000000000003e-29 | NR | WP_032089836.1 | 261299 | g4332 | i0 | 98.3 | 0.687747035573123 | 58 | 1 | 68.8 | 0 | 176 | 3 | 1 | 58 | WP_032089836.1 hypothetical protein [Intestinibacter bartlettii] | diamond | 174 | 110 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Intestinibacter | Intestinibacter bartlettii | ||
| 28937198 | 28937198 | PRJNA1264536_P_NODE_5328_length_244_cov_0.912281_g5254_i0 | PRJNA1264536 | 5328 | 244 | 0.912281 | 2.22596564 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 154 | 3.14e-41 | NR | MBE6951924.1 | 2485925 | g5254 | i0 | 100 | 0.995901639344262 | 81 | 0 | 99.6 | 0 | 1 | 243 | 434 | 514 | MBE6951924.1 hypothetical protein [Oscillospiraceae bacterium] | diamond | 243 | 154 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 29000619 | 29000619 | PRJNA1264536_P_NODE_4328_length_253_cov_0.866667_g4254_i0 | PRJNA1264536 | 4328 | 253 | 0.866667 | 2.19266751 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 138 | 7.99e-37 | NR | MCI9246102.1 | 2044939 | g4254 | i0 | 78.3 | 0.984189723320158 | 83 | 18 | 98.4 | 0 | 251 | 3 | 122 | 204 | MCI9246102.1 aminoacyl-histidine dipeptidase [Clostridia bacterium] | diamond | 249 | 138 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 29000621 | 29000621 | PRJNA1264536_P_NODE_5148_length_245_cov_0.906977_g5074_i0 | PRJNA1264536 | 5148 | 245 | 0.906977 | 2.22209365 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 129 | 1.9e-35 | NR | MBE6943191.1 | 2485925 | g5074 | i0 | 77.5 | 0.979591836734694 | 80 | 18 | 98 | 0 | 1 | 240 | 100 | 179 | MBE6943191.1 ECF transporter S component [Oscillospiraceae bacterium] | diamond | 240 | 129 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 29694543 | 29694543 | PRJNA1264536_P_NODE_3950_length_272_cov_1.336683_g3876_i0 | PRJNA1264536 | 3950 | 272 | 1.336683 | 3.63577776 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 145 | 3.12e-42 | NR | MEG2609380.1 | 1903720 | g3876 | i0 | 100 | 0.772058823529412 | 70 | 0 | 77.2 | 0 | 15 | 224 | 99 | 168 | MEG2609380.1 helix-turn-helix domain-containing protein [Bacilli bacterium] | diamond | 210 | 145 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 32223695 | 32223695 | PRJNA1264536_P_NODE_5198_length_245_cov_0.906977_g5124_i0 | PRJNA1264536 | 5198 | 245 | 0.906977 | 2.22209365 | Faecalibacterium sp. | 1971605 | Bacteria | Bacteria | 175 | 1.48e-50 | NR | MFR7837035.1 | 1971605 | g5124 | i0 | 100 | 0.991836734693878 | 81 | 0 | 99.2 | 0 | 244 | 2 | 343 | 423 | MFR7837035.1 beta-glucuronidase [Faecalibacterium sp.] | diamond | 243 | 175 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Faecalibacterium | Faecalibacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;